RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 ROR1Q01973 937 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 TBL3Q12788 808 aaKnown RBP23.6■■□□□ 1.37
RARA-202ENST00000394081 LRRC36Q1X8D7 754 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 C1orf228Q6PIY5 440 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 TMC7Q7Z402 723 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 CMASQ8NFW8 434 aaPredicted RBP23.6■■□□□ 1.37
RARA-202ENST00000394081 PLEKHG4BQ96PX9 1271 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 PDLIM7Q9NR12 457 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 DMTF1Q9Y222 760 aa23.6■■□□□ 1.37
RARA-202ENST00000394081 DGAT1O75907 488 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 TFAP2AP05549 437 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 GYS1P13807 737 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 CNTFP26441 200 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 POLR2BP30876 1174 aaKnown RBP23.59■■□□□ 1.37
RARA-202ENST00000394081 RBM5P52756 815 aaKnown RBP eCLIP23.59■■□□□ 1.37
RARA-202ENST00000394081 YWHAZP63104 245 aaKnown RBP23.59■■□□□ 1.37
RARA-202ENST00000394081 CNTN2Q02246 1040 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 AHI1Q8N157 1196 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 ACER1Q8TDN7 264 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 C20orf27Q9GZN8 174 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 DNAJC28Q9NX36 388 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 PAK5Q9P286 719 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 DTNAQ9Y4J8 743 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 PTPRJQ12913 1337 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 CCDC195A0A1B0GUA6 201 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 ARHGAP10A1A4S6 786 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 OR6B1O95007 311 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 RAG1P15918 1043 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 MAGEA6P43360 314 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 SULT2A1Q06520 285 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 SLFN12LQ6IEE8 588 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 FBXL19Q6PCT2 694 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 RFX6Q8HWS3 928 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 FBXW8Q8N3Y1 598 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 CATSPER1Q8NEC5 780 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 IMPG2Q9BZV3 1241 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 RBM38Q9H0Z9 239 aaKnown RBP23.59■■□□□ 1.37
RARA-202ENST00000394081 SMYD3Q9H7B4 428 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 ZNF696Q9H7X3 374 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 RSAD1Q9HA92 442 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 POPDC2Q9HBU9 364 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 ZC3H7BQ9UGR2 993 aaKnown RBP23.59■■□□□ 1.37
RARA-202ENST00000394081 PCDHAC2Q9Y5I4 1007 aa23.59■■□□□ 1.37
RARA-202ENST00000394081 CYB561D2O14569 222 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 PIGRP01833 764 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 IL1R2P27930 398 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 SERPINB6P35237 376 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 NLRP11P59045 1033 aaKnown RBP23.58■■□□□ 1.37
RARA-202ENST00000394081 CREB5Q02930 508 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 CYLC2Q14093 348 aaPredicted RBP23.58■■□□□ 1.37
RARA-202ENST00000394081 USP41Q3LFD5 358 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 STRIP1Q5VSL9 837 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 RBM44Q6ZP01 1051 aaKnown RBP23.58■■□□□ 1.37
RARA-202ENST00000394081 SPATA18Q8TC71 538 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 DDI1Q8WTU0 396 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 CFAP36Q96G28 342 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 KCNK16Q96T55 309 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 SLC13A1Q9BZW2 595 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 ZNF395Q9H8N7 513 aaPredicted RBP23.58■■□□□ 1.37
RARA-202ENST00000394081 USP29Q9HBJ7 922 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 RBAKQ9NYW8 714 aaPredicted RBP23.58■■□□□ 1.37
RARA-202ENST00000394081 THEGQ9P2T0 379 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 PSMD13Q9UNM6 376 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 ARID2Q68CP9 1835 aa23.58■■□□□ 1.37
RARA-202ENST00000394081 H3BNX3 289 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 HNRNPRO43390 633 aaKnown RBP23.58■■□□□ 1.36
RARA-202ENST00000394081 SIN3BO75182 1162 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 CCNE2O96020 404 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 APOEP02649 317 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 ALOX15P16050 662 aaPredicted RBP23.58■■□□□ 1.36
RARA-202ENST00000394081 AP3M2P53677 418 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 WNT7BP56706 349 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 USP4Q13107 963 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 MTM1Q13496 603 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 ACAP1Q15027 740 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 NOMO1Q15155 1222 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 NDUFAF2Q8N183 169 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 ARFGAP1Q8N6T3 406 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 FAF2Q96CS3 445 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 CEP170P1Q96L14 293 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 CYP26B1Q9NR63 512 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 PADI4Q9UM07 663 aa23.58■■□□□ 1.36
RARA-202ENST00000394081 PFDN1O60925 122 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 TNFAIP8O95379 198 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 GABRB2P47870 512 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 NCOA4Q13772 614 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 ADRM1Q16186 407 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 FAM98CQ17RN3 349 aaKnown RBP23.57■■□□□ 1.36
RARA-202ENST00000394081 RALGPS1Q5JS13 557 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 ACMSDQ8TDX5 336 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 RTP4Q96DX8 246 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 CCPG1Q9ULG6 757 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 CXorf49A8MYA2 514 aaPredicted RBP23.57■■□□□ 1.36
RARA-202ENST00000394081 TXNDC9O14530 226 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 PROCP04070 461 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 KRT3P12035 628 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 EPHB1P54762 984 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 MTTPP55157 894 aa23.57■■□□□ 1.36
RARA-202ENST00000394081 SFSWAPQ12872 951 aaKnown RBP23.57■■□□□ 1.36
RARA-202ENST00000394081 VPS72Q15906 364 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms