RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 CXCL16Q9H2A7 254 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 TRPC7Q9HCX4 862 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 KMT5AQ9NQR1 393 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 PPP4R2Q9NY27 417 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 DKK4Q9UBT3 224 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 TBX20Q9UMR3 447 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 MAGED2Q9UNF1 606 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 AKAP13Q12802 2813 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 APC2O95996 2303 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 A0A1W2PQD8 194 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 J3QKU1 62 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 BCKDHBP21953 392 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 MUTP22033 750 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 IGFBP6P24592 240 aaPredicted RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 PTGER3P43115 390 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 PEX3P56589 373 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 RPL10AP62906 217 aaKnown RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 TSPY1Q01534 308 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 NOLC1Q14978 699 aaKnown RBP eCLIP8.47□□□□□ -1.05
CASP4-201ENST00000393150 SLC39A12Q504Y0 691 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 IL27RAQ6UWB1 636 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 DTHD1Q6ZMT9 781 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 TOGARAM2Q6ZUX3 1019 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 CATSPER3Q86XQ3 398 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 NAXDQ8IW45 347 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 PNPLA1Q8N8W4 532 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 MDGA1Q8NFP4 955 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 SPATA18Q8TC71 538 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 RLN3Q8WXF3 142 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 BSNDQ8WZ55 320 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 BICD1Q96G01 975 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 ZNF274Q96GC6 653 aaPredicted RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 YTHDC1Q96MU7 727 aaKnown RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 ZMAT2Q96NC0 199 aaKnown RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 POLR3CQ9BUI4 534 aaPredicted RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 RAB34Q9BZG1 259 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 LACRTQ9GZZ8 138 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 TMEM206Q9H813 350 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 C17orf75Q9HAS0 396 aa8.47□□□□□ -1.05
CASP4-201ENST00000393150 FBRSL1Q9HCM7 1045 aaKnown RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 POLR3BQ9NW08 1133 aaPredicted RBP8.47□□□□□ -1.05
CASP4-201ENST00000393150 PI4KAP42356 2102 aa8.46□□□□□ -1.05
CASP4-201ENST00000393150 ITPR1Q14643 2758 aa8.46□□□□□ -1.05
CASP4-201ENST00000393150 WDFY3Q8IZQ1 3526 aa8.46□□□□□ -1.05
CASP4-201ENST00000393150 A0A087WWV3 80 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 TCRBV21S2A2A0A5A6 115 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 E9PAM4 449 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 H0YCG3 227 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 M0R082 166 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 TOM1L1O75674 476 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 SOAT2O75908 522 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.06
CASP4-201ENST00000393150 CLTAP09496 248 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 CPA1P15085 419 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 RPA1P27694 616 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 LRPAP1P30533 357 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 NLRP12P59046 1061 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 ZNF33AQ06730 810 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 CYP4F3Q08477 520 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 NFE2Q16621 373 aaPredicted RBP8.46□□□□□ -1.06
CASP4-201ENST00000393150 BTBD8Q5XKL5 378 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 TXNDC8Q6A555 127 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 EFCAB13Q8IY85 973 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 OLIG1Q8TAK6 271 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 ZNF417Q8TAU3 575 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 ZNF587Q96SQ5 575 aaPredicted RBP8.46□□□□□ -1.06
CASP4-201ENST00000393150 PI4K2AQ9BTU6 479 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 KIFC3Q9BVG8 833 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 TARS2Q9BW92 718 aaKnown RBP8.46□□□□□ -1.06
CASP4-201ENST00000393150 RPF1Q9H9Y2 349 aaKnown RBP8.46□□□□□ -1.06
CASP4-201ENST00000393150 TMEM74BQ9NUR3 256 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 EHD2Q9NZN4 543 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 PPM1HQ9ULR3 514 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 CCL26Q9Y258 94 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.06
CASP4-201ENST00000393150 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 RAI2Q9Y5P3 530 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 CYP46A1Q9Y6A2 500 aa8.46□□□□□ -1.06
CASP4-201ENST00000393150 COL4A2P08572 1712 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 A0A087WV48 116 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 OTOL1A6NHN0 477 aaPredicted RBP8.45□□□□□ -1.06
CASP4-201ENST00000393150 LARGE1O95461 756 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 CER1O95813 267 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 CAPNS1P04632 268 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 HLA-EP13747 358 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 CD59P13987 128 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 HDCP19113 662 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 EPHA1P21709 976 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 RAD51AP2Q09MP3 1159 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 STK3Q13188 491 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
CASP4-201ENST00000393150 TMPRSS7Q7RTY8 843 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 CD302Q8IX05 232 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 TXNDC5Q8NBS9 432 aaKnown RBP8.45□□□□□ -1.06
CASP4-201ENST00000393150 SENP8Q96LD8 212 aa8.45□□□□□ -1.06
CASP4-201ENST00000393150 BBC3Q96PG8 261 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms