RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MFSD14AQ96MC6 490 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 PGLYRP2Q96PD5 576 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 HIST1H2AJQ99878 128 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 H2AFJQ9BTM1 129 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 SPDYE5A6NIY4 337 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 PEX10O60683 326 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 PGK1P00558 417 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 RGMBQ6NW40 437 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 LONP2Q86WA8 852 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 KATNAL2Q8IYT4 538 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 ADAM32Q8TC27 787 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 ERP27Q96DN0 273 aa17.14■□□□□ 0.33
SCN3B-202ENST00000392770 RIPK2O43353 540 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 PYGLP06737 847 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 LRRC34Q8IZ02 419 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 CELF6Q96J87 481 aaKnown RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 APOL2Q9BQE5 337 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 H3BQF6 201 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 FAM153BP0C7A2 387 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 CCR1P32246 355 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 PBX1P40424 430 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 EPHB3P54753 998 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 HIC1Q14526 733 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 LRRC8EQ6NSJ5 796 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 LRRC6Q86X45 466 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 FAM153AQ9UHL3 310 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 BTNL10A8MVZ5 291 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 DNAJB2P25686 324 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 FMO1Q01740 532 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 ELAVL2Q12926 359 aaKnown RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 CEP41Q9BYV8 373 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 LRRC40Q9H9A6 602 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 IGLV3-22A0A075B6J6 115 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 PRPF4O43172 522 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 HNRNPCL1O60812 293 aaKnown RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 JCHAINP01591 159 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 AMPD1P23109 780 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 SCNN1GP51170 649 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 TTC36A6NLP5 189 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 DNAJC3Q13217 504 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 TMEM86AQ8N2M4 240 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 SLC26A7Q8TE54 656 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 MRPS31Q92665 395 aaKnown RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 CASS4Q9NQ75 786 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.13■□□□□ 0.33
SCN3B-202ENST00000392770 RAB21Q9UL25 225 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
SCN3B-202ENST00000392770 DNALI1O14645 258 aaPredicted RBP17.12■□□□□ 0.33
SCN3B-202ENST00000392770 ASS1P00966 412 aaKnown RBP17.12■□□□□ 0.33
SCN3B-202ENST00000392770 GCKP35557 465 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 SERPINB8P50452 374 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 SENP8Q96LD8 212 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 SEMA4AQ9H3S1 761 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 STOML1Q9UBI4 398 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 CHRM3P20309 590 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 MFN1Q8IWA4 741 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 LATS2Q9NRM7 1088 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 TMEM247A6NEH6 219 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 C2orf81A6NN90 581 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 PYGBP11216 843 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 SKIV2LQ15477 1246 aaKnown RBP17.12■□□□□ 0.33
SCN3B-202ENST00000392770 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 ELOVL4Q9GZR5 314 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 RRN3Q9NYV6 651 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 CHADLQ6NUI6 762 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 MAGEB18Q96M61 343 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 NT5MQ9NPB1 228 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 DCDC2Q9UHG0 476 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 SLC13A4Q9UKG4 626 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 NCAM2O15394 837 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 GLRA3O75311 464 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 BDNFP23560 247 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 ACAP1Q15027 740 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 TMC3Q7Z5M5 1100 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 BSNDQ8WZ55 320 aa17.12■□□□□ 0.33
SCN3B-202ENST00000392770 KPNA1P52294 538 aaPredicted RBP17.11■□□□□ 0.33
SCN3B-202ENST00000392770 TBX4P57082 545 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 AENQ8WTP8 325 aaKnown RBP17.11■□□□□ 0.33
SCN3B-202ENST00000392770 CHST7Q9NS84 486 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 KLC4Q9NSK0 619 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 BTBD7Q9P203 1132 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 TRIM17Q9Y577 477 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 RHOCP08134 193 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
SCN3B-202ENST00000392770 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms