RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 MTSS1O43312 755 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 SLC2A3P11169 496 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 MBL2P11226 248 aaPredicted RBP17.09■□□□□ 0.33
SNX9-201ENST00000392185 KRT4P19013 534 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 KDELR1P24390 212 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 NPNTQ6UXI9 565 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 NPLOC4Q8TAT6 608 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
SNX9-201ENST00000392185 XAB2Q9HCS7 855 aaKnown RBP17.09■□□□□ 0.33
SNX9-201ENST00000392185 APOBEC2Q9Y235 224 aaKnown RBP17.09■□□□□ 0.33
SNX9-201ENST00000392185 PLCH1Q4KWH8 1693 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 H7C4K7 107 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 NPR3P17342 541 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 SSTR1P30872 391 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 SLC11A2P49281 568 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
SNX9-201ENST00000392185 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 H0Y626 953 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 TGM2P21980 687 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 RBL1P28749 1068 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 CCR1P32246 355 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 ERFP50548 548 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 DNAJC3Q13217 504 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 NAPEPLDQ6IQ20 393 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 SGF29Q96ES7 293 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
SNX9-201ENST00000392185 USP12O75317 370 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.33
SNX9-201ENST00000392185 CDH18Q13634 790 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 TSNAXIP1Q2TAA8 658 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 LVRNQ6Q4G3 990 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 FRA10AC1Q70Z53 315 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 BLOC1S5Q8TDH9 187 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 FAM136AQ96C01 138 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 TBCBQ99426 244 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 ATXN3LQ9H3M9 355 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 PCDH9Q9HC56 1237 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 SIX2Q9NPC8 291 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 TXLNGQ9NUQ3 528 aa17.08■□□□□ 0.33
SNX9-201ENST00000392185 MSCO60682 206 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 CABYRO75952 493 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 TTC4O95801 387 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 TRIM68Q6AZZ1 485 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 PHF13Q86YI8 300 aaPredicted RBP17.08■□□□□ 0.32
SNX9-201ENST00000392185 ARHGAP18Q8N392 663 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 HES6Q96HZ4 224 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.08■□□□□ 0.32
SNX9-201ENST00000392185 F5H5T6 163 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 FKTNO75072 461 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 MMP8P22894 467 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 ZNF177Q13360 481 aaPredicted RBP17.08■□□□□ 0.32
SNX9-201ENST00000392185 SH2D4BQ5SQS7 431 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 KATNAL2Q8IYT4 538 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 ANKRD52Q8NB46 1076 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 MRPS31Q92665 395 aaKnown RBP17.08■□□□□ 0.32
SNX9-201ENST00000392185 ELOVL4Q9GZR5 314 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 EPN3Q9H201 632 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 ARHGEF38Q9NXL2 777 aa17.08■□□□□ 0.32
SNX9-201ENST00000392185 SMG5Q9UPR3 1016 aaKnown RBP17.08■□□□□ 0.32
SNX9-201ENST00000392185 SNX2O60749 519 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 TPH1P17752 444 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 MORF4L2Q15014 288 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 ZC3H12AQ5D1E8 599 aaKnown RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 C9orf57Q5W0N0 161 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 ZNF473Q8WTR7 871 aaKnown RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 SNRNP25Q9BV90 132 aaKnown RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 TKTL2Q9H0I9 626 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 POPDC2Q9HBU9 364 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 AAASQ9NRG9 546 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■■■■□ 23.2
SNX9-201ENST00000392185 ZFP69BQ9UJL9 534 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 MYO1CO00159 1063 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 PIAS1O75925 651 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 DCTN3O75935 186 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 GEMIN4P57678 1058 aaKnown RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 TMC3Q7Z5M5 1100 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 NDRG1Q92597 394 aaKnown RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 PWWP2AQ96N64 755 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 EGFL8Q99944 293 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 NPHS2Q9NP85 383 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 HACD3Q9P035 362 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 COG5Q9UP83 839 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 NCANO14594 1321 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 GRK4P32298 578 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 NT5MQ9NPB1 228 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 GLI3P10071 1580 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 H0Y3Z8 333 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 RGS20O76081 388 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 SPRP35270 261 aaPredicted RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 ELK3P41970 407 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 DDX53Q86TM3 631 aaKnown RBP17.07■□□□□ 0.32
SNX9-201ENST00000392185 LRRC52Q8N7C0 313 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 TFAP2BQ92481 460 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 ZNF516Q92618 1163 aa17.07■□□□□ 0.32
SNX9-201ENST00000392185 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
SNX9-201ENST00000392185 CA12O43570 354 aa17.06■□□□□ 0.32
SNX9-201ENST00000392185 TRUB2O95900 331 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms