RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RNF220Q5VTB9 566 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 ADCK2Q7Z695 626 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 ZBTB46Q86UZ6 589 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 GRAPLQ8TC17 118 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 MED15Q96RN5 788 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 CROTQ9UKG9 612 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 UBE2Q2LH0YL09 131 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 PSMA8Q8TAA3 256 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 SLC20A1Q8WUM9 679 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 NDNQ99608 321 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 FRMD8P1Q9BZ68 369 aaPredicted RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 DCLK3Q9C098 648 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 TJP2Q9UDY2 1190 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 CDC42BPBQ9Y5S2 1711 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 MT-CO1P00395 513 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 FOLH1Q04609 750 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 FASTKQ14296 549 aaKnown RBP16.64■□□□□ 0.25
SHANK1-204ENST00000391814 SPOCD1Q6ZMY3 1216 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 APPL2Q8NEU8 664 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 TADA1Q96BN2 335 aa16.64■□□□□ 0.25
SHANK1-204ENST00000391814 F8W810 466 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 UNC5CO95185 931 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 S100A9P06702 114 aaKnown RBP16.63■□□□□ 0.25
SHANK1-204ENST00000391814 CNTFP26441 200 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 MZF1P28698 734 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-204ENST00000391814 CNGA2Q16280 664 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 EFCAB3Q8N7B9 438 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 WWOXQ9NZC7 414 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 DKK3Q9UBP4 350 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 STARD13Q9Y3M8 1113 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 KRT20P35900 424 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 TBX2Q13207 712 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-204ENST00000391814 PLA2G4FQ68DD2 849 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 SNX32Q86XE0 403 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 POC5Q8NA72 575 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 RNF149Q8NC42 400 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 VPS33AQ96AX1 596 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 CENPTQ96BT3 561 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 C9orf16Q9BUW7 83 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
SHANK1-204ENST00000391814 SH3GLB1Q9Y371 365 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 SDR42E2A6NKP2 422 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 PSMD11O00231 422 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 SERPINH1P50454 418 aaKnown RBP16.63■□□□□ 0.25
SHANK1-204ENST00000391814 SLC5A9Q2M3M2 681 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 BDH2Q9BUT1 245 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 MINPP1Q9UNW1 487 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 AKT1P31749 480 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 KHDRBS2Q5VWX1 349 aaKnown RBP16.63■□□□□ 0.25
SHANK1-204ENST00000391814 FNIP1Q8TF40 1166 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 GTF3C4Q9UKN8 822 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 CENPXA8MT69 81 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 NAPEPLDQ6IQ20 393 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 DHRSXQ8N5I4 330 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 FAM136AQ96C01 138 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 FBXO40Q9UH90 709 aa16.63■□□□□ 0.25
SHANK1-204ENST00000391814 CASP5P51878 434 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 ORC1Q13415 861 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 DDI2Q5TDH0 399 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 GPR107Q5VW38 600 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 SLC47A2Q86VL8 602 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 MARK4Q96L34 752 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 RNF145Q96MT1 663 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 DRD4P21917 467 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 PIK3R1P27986 724 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHANK1-204ENST00000391814 C1DQ13901 141 aaKnown RBP16.62■□□□□ 0.25
SHANK1-204ENST00000391814 DGCR6Q14129 220 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 QPCTQ16769 361 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 OSCP1Q8WVF1 389 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 TBC1D10AQ9BXI6 508 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 THAP1Q9NVV9 213 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 MBD2Q9UBB5 411 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 ZNF222Q9UK12 451 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 LSM3P62310 102 aaKnown RBP16.62■□□□□ 0.25
SHANK1-204ENST00000391814 SLC25A3Q00325 362 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 PUDPQ08623 228 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 DCAF6Q58WW2 860 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 CDKAL1Q5VV42 579 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 AKAP14Q86UN6 197 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 CREG2Q8IUH2 290 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 FRMD8Q9BZ67 464 aaPredicted RBP16.62■□□□□ 0.25
SHANK1-204ENST00000391814 DMTF1Q9Y222 760 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 CCDC182A6NF36 153 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 MAP3K13O43283 966 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 MPOP05164 745 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 GRB10Q13322 594 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 CCDC126Q96EE4 140 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 RNFT2Q96EX2 444 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 SNTNA6NMZ2 147 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 EXTL3O43909 919 aa16.62■□□□□ 0.25
SHANK1-204ENST00000391814 FCHO2Q0JRZ9 810 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms