RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SRRM3A6NNA2 597 aaPredicted RBP1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 M0R3H8 397 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 FYB1O15117 783 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 PPP1R3DO95685 299 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 MT-CO1P00395 513 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 SERPINB2P05120 415 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 HOXA7P31268 230 aaPredicted RBP1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 KRT2P35908 639 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 PDLIM4P50479 330 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 PRKAG1P54619 331 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 SOX8P57073 446 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 TTLL5Q6EMB2 1281 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 ZNF449Q6P9G9 518 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 SRGAP1Q7Z6B7 1085 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 TFAP2DQ7Z6R9 452 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 RAB11FIP4Q86YS3 637 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 CELF5Q8N6W0 485 aaKnown RBP1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 C12orf76Q8N812 135 aaPredicted RBP1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 BPIFB1Q8TDL5 484 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 BCAS4Q8TDM0 211 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 CHAC2Q8WUX2 184 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 UBXN4Q92575 508 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 HIC2Q96JB3 615 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 FZD3Q9NPG1 666 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 LMBRD1Q9NUN5 540 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 ASAP1Q9ULH1 1129 aa1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 MAGED2Q9UNF1 606 aaPredicted RBP1.84□□□□□ -2.11
RNU6-239P-201ENST00000390990 CLEC18AA5D8T8 446 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 C16orf96A6NNT2 1141 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 SMTNL1A8MU46 457 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 SLC16A6O15403 523 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 AKAP10O43572 662 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 XPOTO43592 962 aaKnown RBP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 TMPRSS11DO60235 418 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 CYP2C9P11712 490 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 MCM5P33992 734 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 SLC11A2P49281 568 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 MAP2K6P52564 334 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 ART1P52961 327 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 BCAT1P54687 386 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 SATB1Q01826 763 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 DEUP1Q05D60 604 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 CCNIQ14094 377 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 ZNF718Q3SXZ3 478 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 MGAT5BQ3V5L5 792 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 CT47A1Q5JQC4 288 aaPredicted RBP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 CEP85LQ5SZL2 805 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 RNF219Q5W0B1 726 aaPredicted RBP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 DENND2CQ68D51 928 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 MORC1Q86VD1 984 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 MUC20Q8N307 709 aaPredicted RBP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 CNTD1Q8N815 330 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 CLEC18CQ8NCF0 446 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 DBF4BQ8NFT6 615 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 SREK1Q8WXA9 508 aaKnown RBP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 PHF21BQ96EK2 531 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 DOCK7Q96N67 2140 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 FCRL5Q96RD9 977 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 PIMREGQ9BSJ6 248 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 SPRY4Q9C004 299 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 THSD1Q9NS62 852 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 PNPOQ9NVS9 261 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 PCDHA6Q9UN73 950 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 USP22Q9UPT9 525 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 TMX2Q9Y320 296 aa1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.83□□□□□ -2.12
RNU6-239P-201ENST00000390990 PRR23AA6NEV1 266 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 ANTXRLA6NF34 631 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 BTBD18B2RXH4 712 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 F8W810 466 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 UGDHO60701 494 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 FTLP02792 175 aaPredicted RBP1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 CPEP16870 476 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 ADKP55263 362 aaKnown RBP1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 WNT3P56703 355 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 TIRAPP58753 221 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 GPC5P78333 572 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 POU5F1BQ06416 359 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 COASYQ13057 564 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 PLS1Q14651 629 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 PCBP2Q15366 365 aaKnown RBP eCLIP1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 ANO6Q4KMQ2 910 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 PLA1AQ53H76 456 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 WASHC2DQ5SRD0 308 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 CERCAMQ5T4B2 595 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 THEMIS2Q5TEJ8 643 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 SPSB3Q6PJ21 355 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 MEX3BQ6ZN04 569 aaKnown RBP1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 TRAPPC11Q7Z392 1133 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 ARMC9Q7Z3E5 817 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 GAS2L3Q86XJ1 694 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 INPP4AQ96PE3 977 aaPredicted RBP1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 VN1R3Q9BXE9 311 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 C1QTNF5Q9BXJ0 243 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 SEZ6LQ9BYH1 1024 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 TM6SF1Q9BZW5 370 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 NUAK2Q9H093 628 aa1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 MOV10Q9HCE1 1003 aaKnown RBP1.82□□□□□ -2.12
RNU6-239P-201ENST00000390990 PAPOLBQ9NRJ5 636 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms