RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 SCD5Q86SK9 330 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 TTC16Q8NEE8 873 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 ENOX1Q8TC92 643 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 OSCP1Q8WVF1 389 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 FAM3CQ92520 227 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 NELL1Q92832 810 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 HINFPQ9BQA5 517 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 TUBGCP2Q9BSJ2 902 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 CYLDQ9NQC7 956 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 THG1LQ9NWX6 298 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 APEX2Q9UBZ4 518 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 NDRG2Q9UN36 371 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 MAN2B1O00754 1011 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 TBX18O95935 607 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 HOXB3P14651 431 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 KPNA1P52294 538 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 RUNX3Q13761 415 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 PDGFRLQ15198 375 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 GAB4Q2WGN9 574 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 VWA3BQ502W6 1294 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 LCLAT1Q6UWP7 414 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 RALGPS2Q86X27 583 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 UBA3Q8TBC4 463 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 MSANTD3Q96H12 275 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 LINC00597Q9H2U6 94 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 C8orf33Q9H7E9 229 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 ACP6Q9NPH0 428 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 DUS2Q9NX74 493 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 FBXO4Q9UKT5 387 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 SPTBN2O15020 2390 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 SPAG17Q6Q759 2223 aa12.15□□□□□ -0.46
APOBEC3F-202ENST00000381565 ACACBO00763 2458 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 M0QYV0 167 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 MDM4O15151 490 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 GREM1O60565 184 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 SETSIPP0DME0 302 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 CHRNB1P11230 501 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 TGM1P22735 817 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 GJA4P35212 333 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 RPS9P46781 194 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 IFNAR2P48551 515 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 TKTL1P51854 596 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 TYRO3Q06418 890 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 ADIGQ0VDE8 80 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 CCINQ13939 588 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 GAS6Q14393 721 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 NCAPHQ15003 741 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 PON2Q15165 354 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 CC2D1AQ6P1N0 951 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 ZBTB44Q8NCP5 570 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 SHC3Q92529 594 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 NDRG1Q92597 394 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 NELL2Q99435 816 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 ULBP1Q9BZM6 244 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 ECT2Q9H8V3 914 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 RBM12Q9NTZ6 932 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 SPATA6Q9NWH7 488 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 HESX1Q9UBX0 185 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 NUDT5Q9UKK9 219 aa12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 MRPS17Q9Y2R5 130 aaKnown RBP12.14□□□□□ -0.47
APOBEC3F-202ENST00000381565 TPRP12270 2363 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 NYNRINQ9P2P1 1898 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 LILRB5O75023 590 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 KRT37O76014 449 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 CYP17A1P05093 508 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 RARGP13631 454 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 KRT5P13647 590 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 CSTF1Q05048 431 aaKnown RBP12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 KRT31Q15323 416 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 CNGA2Q16280 664 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 PM20D1Q6GTS8 502 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 FSTL4Q6MZW2 842 aa12.13□□□□□ -0.47
APOBEC3F-202ENST00000381565 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms