RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 FAM49BQ9NUQ9 324 aa13.71□□□□□ -0.21
RPAIN-202ENST00000381208 DEC1Q9P2X7 70 aa13.71□□□□□ -0.21
RPAIN-202ENST00000381208 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
RPAIN-202ENST00000381208 LSM7Q9UK45 103 aaKnown RBP13.71□□□□□ -0.21
RPAIN-202ENST00000381208 GOLGA6L4A6NEF3 574 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 PPP3CAQ08209 521 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 BECN1Q14457 450 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 LY6G5CQ5SRR4 150 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 SPOPLQ6IQ16 392 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 CLEC20AQ6ZU45 233 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 HTR3DQ70Z44 454 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 ZNF276Q8N554 614 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 EFCAB3Q8N7B9 438 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 C12orf29Q8N999 325 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 TSG101Q99816 390 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 DUSP15Q9H1R2 295 aaPredicted RBP13.71□□□□□ -0.22
RPAIN-202ENST00000381208 CCSER2Q9H7U1 834 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 SPHK2Q9NRA0 654 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 WDR35Q9P2L0 1181 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 MAPK8IP1Q9UQF2 711 aa13.71□□□□□ -0.22
RPAIN-202ENST00000381208 RALGAPA1Q6GYQ0 2036 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 DCDC2BA2VCK2 349 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 BEST1O76090 585 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 SMC2O95347 1197 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-202ENST00000381208 ADORA2BP29275 332 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 MPLP40238 635 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 DPP6P42658 865 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 MXI1P50539 228 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 SEC13P55735 322 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 SLC8A3P57103 927 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 COBLL1Q53SF7 1204 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 ETFBKMTQ8IXQ9 262 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 FBXL13Q8NEE6 735 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 SPACA7Q96KW9 195 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 GSDMAQ96QA5 445 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 XPO6Q96QU8 1125 aaKnown RBP13.7□□□□□ -0.22
RPAIN-202ENST00000381208 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 UBXN6Q9BZV1 441 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 APOBEC3GQ9HC16 384 aaKnown RBP13.7□□□□□ -0.22
RPAIN-202ENST00000381208 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 ZNF510Q9Y2H8 683 aa13.7□□□□□ -0.22
RPAIN-202ENST00000381208 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 RALAP11233 206 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 ACO1P21399 889 aaKnown RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 HOXC13P31276 330 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 GBP1P32455 592 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 KIR2DL1P43626 348 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 PLA2G4AP47712 749 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 SLC6A11P48066 632 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 KIF11P52732 1056 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 NUCB2P80303 420 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 E2F5Q15329 346 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 ANO4Q32M45 955 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 SPDYCQ5MJ68 293 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 ANO7Q6IWH7 933 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 CCDC186Q7Z3E2 898 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 BBS7Q8IWZ6 715 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 ARHGAP18Q8N392 663 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 IL17RCQ8NAC3 791 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 TXNDC5Q8NBS9 432 aaKnown RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 KLF16Q9BXK1 252 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-202ENST00000381208 GOLPH3LQ9H4A5 285 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 RAB20Q9NX57 234 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 CLIC5Q9NZA1 410 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 STARD13Q9Y3M8 1113 aa13.69□□□□□ -0.22
RPAIN-202ENST00000381208 BCLAF3A2AJT9 711 aaKnown RBP13.68□□□□□ -0.22
RPAIN-202ENST00000381208 HHLA1C9JL84 531 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 TULP3O75386 442 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 CAVIN2O95810 425 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 ADRB1P08588 477 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 RARGP13631 454 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 CD58P19256 250 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 PPP1R2P41236 205 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 YWHAEP62258 255 aaKnown RBP13.68□□□□□ -0.22
RPAIN-202ENST00000381208 CREB5Q02930 508 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 ORC1Q13415 861 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 ZNF658Q5TYW1 1059 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-202ENST00000381208 PMS2CLQ68D20 193 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 CCDC33Q8N5R6 958 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 ELMO3Q96BJ8 720 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 TWNKQ96RR1 684 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPAIN-202ENST00000381208 POLR3BQ9NW08 1133 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-202ENST00000381208 MARK1Q9P0L2 795 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 USP3Q9Y6I4 520 aa13.68□□□□□ -0.22
RPAIN-202ENST00000381208 SCAMP3O14828 347 aaKnown RBP13.67□□□□□ -0.22
RPAIN-202ENST00000381208 GDF9O60383 454 aa13.67□□□□□ -0.22
RPAIN-202ENST00000381208 KLF8O95600 359 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms