RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PPP6R2O75170 966 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 NDUFS2O75306 463 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 ZDHHC11BP0C7U3 371 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 E2F4Q16254 413 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF423Q2M1K9 1284 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 SYCP2LQ5T4T6 812 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 UNC13DQ70J99 1090 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 TMEM25Q86YD3 366 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 C12orf56Q8IXR9 622 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 MINDY1Q8N5J2 469 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 DEFB119Q8N690 84 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 FAM124BQ9H5Z6 455 aaPredicted RBP16.92■□□□□ 0.3
VCX3A-201ENST00000381089 SMYD3Q9H7B4 428 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 CAPN10Q9HC96 672 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 SUSD2Q9UGT4 822 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 A0A1W2PQD8 194 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 FAM92AA1XBS5 289 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 NEDD8-MDP1E9PL57 170 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 GNSP15586 552 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 WASP42768 502 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 CDH8P55286 799 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 NCOA4Q13772 614 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 SCARA5Q6ZMJ2 495 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 HTR3DQ70Z44 454 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 RGL4Q8IZJ4 473 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 IPO4Q8TEX9 1081 aaKnown RBP16.91■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF516Q92618 1163 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 FOXJ1Q92949 421 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF396Q96N95 335 aaPredicted RBP16.91■□□□□ 0.3
VCX3A-201ENST00000381089 BBS2Q9BXC9 721 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
VCX3A-201ENST00000381089 MTMR6Q9Y217 621 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 CEP192Q8TEP8 1941 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 ATRXP46100 2492 aa16.91■□□□□ 0.3
VCX3A-201ENST00000381089 CACNA1EQ15878 2313 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 IGHV1OR15-9A0A0B4J2B8 117 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 STX6O43752 255 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 CACNG3O60359 315 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 TYRP14679 529 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 ATP5C1P36542 298 aaKnown RBP16.9■□□□□ 0.3
VCX3A-201ENST00000381089 SLC14A1Q13336 389 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 KNOP1Q1ED39 458 aaKnown RBP16.9■□□□□ 0.3
VCX3A-201ENST00000381089 BMT2Q1RMZ1 405 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 WDR45BQ5MNZ6 344 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 EGFLAMQ63HQ2 1017 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 ACOT1Q86TX2 421 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 FUKQ8N0W3 1084 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 HSPA12BQ96MM6 686 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 FSCN3Q9NQT6 498 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 KLK13Q9UKR3 277 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 CYP8B1Q9UNU6 501 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 PCDHB9Q9Y5E1 797 aa16.9■□□□□ 0.3
VCX3A-201ENST00000381089 SPEGQ15772 3267 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 A0A1W2PQF6 199 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 GFRA2O00451 464 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 CUTAO60888 179 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 NDUFV2P19404 249 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 SGSM1Q2NKQ1 1148 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 PLEKHG6Q3KR16 790 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 TPGS1Q6ZTW0 290 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 PAQR9Q6ZVX9 377 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 TADA2BQ86TJ2 420 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 SLC2A14Q8TDB8 520 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 GABRG3Q99928 467 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 DNAI2Q9GZS0 605 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 SLC39A2Q9NP94 309 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 DNAAF2Q9NVR5 837 aaKnown RBP16.89■□□□□ 0.29
VCX3A-201ENST00000381089 MARK1Q9P0L2 795 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 MYH10P35580 1976 aa16.89■□□□□ 0.29
VCX3A-201ENST00000381089 ADAMTS9Q9P2N4 1935 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 PVALEFA0A1B0GWK0 134 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 YEATS4O95619 227 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 RPN1P04843 607 aaKnown RBP16.88■□□□□ 0.29
VCX3A-201ENST00000381089 FAM200BP0CF97 657 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 CCDC130P13994 396 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 DGKGP49619 791 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 CASP4P49662 377 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 MAP3K7CLP57077 242 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 STARD3Q14849 445 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 E2F5Q15329 346 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 UNC93AQ86WB7 457 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 MIB1Q86YT6 1006 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 PARD3BQ8TEW8 1205 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 TAF4BQ92750 862 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 SMOQ99835 787 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 KLF16Q9BXK1 252 aaPredicted RBP16.88■□□□□ 0.29
VCX3A-201ENST00000381089 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
VCX3A-201ENST00000381089 CSNK1G1Q9HCP0 422 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 CYLDQ9NQC7 956 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 FAM13BQ9NYF5 915 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 AKAP13Q12802 2813 aa16.88■□□□□ 0.29
VCX3A-201ENST00000381089 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
VCX3A-201ENST00000381089 TRIM24O15164 1050 aa16.87■□□□□ 0.29
VCX3A-201ENST00000381089 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
VCX3A-201ENST00000381089 CLDN10P78369 228 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms