RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SCN5AQ14524 2016 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 DNALI1O14645 258 aaPredicted RBP20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 NRP1O14786 923 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 RIPK2O43353 540 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 NBNO60934 754 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 NOS2P35228 1153 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 SULT1E1P49888 294 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 GDF10P55107 478 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 IFFO1Q0D2I5 559 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 GPNMBQ14956 572 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 PPP6R3Q5H9R7 873 aaPredicted RBP20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 INTS6LQ5JSJ4 861 aaKnown RBP20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 RAB41Q5JT25 222 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 GPRIN1Q7Z2K8 1008 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 VSIG1Q86XK7 387 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 P3H4Q92791 437 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 MYLPFQ96A32 169 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 MAGEB5Q9BZ81 275 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 ULBP1Q9BZM6 244 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 PCDH9Q9HC56 1237 aa20.69■□□□□ 0.9
PDLIM5-205ENST00000380180 FBXO21O94952 628 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 RBP3P10745 1247 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 L1CAMP32004 1257 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 PITX1P78337 314 aaPredicted RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 DSC1Q08554 894 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 HFE2Q6ZVN8 426 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 CCDC185Q8N715 623 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 PQLC3Q8N755 202 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 OR10T2Q8NGX3 314 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 PCDH19Q8TAB3 1148 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 RSAD2Q8WXG1 361 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 NT5C3BQ969T7 300 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 TMEM209Q96SK2 561 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 CDC42EP4Q9H3Q1 356 aaKnown RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 DHX35Q9H5Z1 703 aaKnown RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 CSNK1G1Q9HCP0 422 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 TMLHEQ9NVH6 421 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 DNAJC17Q9NVM6 304 aaKnown RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 PSD3Q9NYI0 1048 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 AP4E1Q9UPM8 1137 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 TTC3P53804 2025 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 HHLA1C9JL84 531 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 MCF2LO15068 1137 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 DAOAP59103 153 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 BFSP2Q13515 415 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 NOMO1Q15155 1222 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 DPYSL2Q16555 572 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 SYPL2Q5VXT5 272 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 C1orf228Q6PIY5 440 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 TRMT10CQ7L0Y3 403 aaKnown RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 LRRTM3Q86VH5 581 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 UNC45BQ8IWX7 931 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 THEM5Q8N1Q8 247 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 PLD5Q8N7P1 536 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 URGCPQ8TCY9 931 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 PKMYT1Q99640 499 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 ZNF670Q9BS34 389 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 SEZ6LQ9BYH1 1024 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 POPDC2Q9HBU9 364 aa20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 TPX2Q9ULW0 747 aaKnown RBP20.68■□□□□ 0.9
PDLIM5-205ENST00000380180 BDNFP23560 247 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 MTFR1Q15390 333 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 KRT71Q3SY84 523 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 FAM131BQ86XD5 332 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 COLGALT2Q8IYK4 626 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 DBF4BQ8NFT6 615 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 DEFB118Q96PH6 123 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 SLC2A13Q96QE2 648 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 NPY6RQ99463 290 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 CNGB3Q9NQW8 809 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 TBC1D13Q9NVG8 400 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 MTMR10Q9NXD2 777 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 NAALADL1Q9UQQ1 740 aa20.67■□□□□ 0.9
PDLIM5-205ENST00000380180 YJEFN3A6XGL0 299 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 HMGB1P1B2RPK0 211 aaPredicted RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 E7ENQ6 273 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 ENPP3O14638 875 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 APOL1O14791 398 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 FYNP06241 537 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 USP17L7P0C7H9 530 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 TYMPP19971 482 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 LMAN1P49257 510 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 OTUD1Q5VV17 481 aaPredicted RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 SLC9A4Q6AI14 798 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 B4GALNT4Q76KP1 1039 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 ZC3H18Q86VM9 953 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 UHMK1Q8TAS1 419 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 FAF2Q96CS3 445 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 PAK6Q9NQU5 681 aaPredicted RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 TMEM161AQ9NX61 479 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 KANSL3Q9P2N6 904 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 VWA8A3KMH1 1905 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 ARHGEF37A1IGU5 675 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 OR1G1P47890 313 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 BCAR1P56945 870 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 RNASELQ05823 741 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 PLEKHG4Q58EX7 1191 aa20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 DNAJC21Q5F1R6 531 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-205ENST00000380180 BNIPLQ7Z465 357 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms