RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SLC1A6P48664 564 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 SH3BGRP55822 239 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 C15orf59Q2T9L4 293 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 FASTKD1Q53R41 847 aaKnown RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 N4BP2L1Q5TBK1 243 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 C4orf50Q6ZRC1 276 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 DEFB107AQ8IZN7 70 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 LMO3Q8TAP4 145 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 C10orf82Q8WW14 230 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 VCPIP1Q96JH7 1222 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 GCNAQ96QF7 691 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 KLHL4Q9C0H6 718 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 FAM49AQ9H0Q0 323 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-202ENST00000379826 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 PAPPAQ13219 1627 aa11.79□□□□□ -0.52
SMAD9-202ENST00000379826 A0A0B4J269 797 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 FDX1P10109 184 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 CXCL8P10145 99 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RARS2Q5T160 578 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 POLNQ7Z5Q5 900 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 PHF13Q86YI8 300 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RYBPQ8N488 228 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 FAM172AQ8WUF8 416 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 UNKQ9C0B0 810 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SNX9Q9Y5X1 595 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 GLTPD2A6NH11 291 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 A8MXQ7 604 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 MICAL2O94851 1124 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RAG1P15918 1043 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 STIP1P31948 543 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 NRLP54845 237 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 FAM117BQ6P1L5 589 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 WDR49Q8IV35 697 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SIX6OS1Q8N1H7 587 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 JOSD2Q8TAC2 188 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RXFP2Q8WXD0 754 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 USP13Q92995 863 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 PEX11AO75192 247 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SEC24DO94855 1032 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 HMGCRP04035 888 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 TPBGLP0DKB5 382 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 MYH1P12882 1939 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 ANPEPP15144 967 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RBL1P28749 1068 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SERPINB9P50453 376 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 MRPS9P82933 396 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RWDD4Q6NW29 188 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 HDAC11Q96DB2 347 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 ZNF212Q9UDV6 495 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 DPYSL4O14531 572 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 UNGP13051 313 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 POU5F1BQ06416 359 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 TAF5Q15542 800 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SERAC1Q96JX3 654 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 C2orf40Q9H1Z8 148 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RHBDL2Q9NX52 303 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 DRG1Q9Y295 367 aaKnown RBP11.78□□□□□ -0.52
SMAD9-202ENST00000379826 TCRBV9S1A1TA0A576 114 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 SOX11P35716 441 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RGS2P41220 211 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 EML3Q32P44 896 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 C12orf56Q8IXR9 622 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 NETO2Q8NC67 525 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 CMTM5Q96DZ9 223 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
SMAD9-202ENST00000379826 GLI3P10071 1580 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 RDM1Q8NG50 284 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 NMUR2Q9GZQ4 415 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 TASP1Q9H6P5 420 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 LRRC4Q9HBW1 653 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 DTNAQ9Y4J8 743 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 WASF2Q9Y6W5 498 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 LAMB1P07942 1786 aa11.77□□□□□ -0.52
SMAD9-202ENST00000379826 MYH7BA7E2Y1 1941 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 LIN7AO14910 233 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 AMPD1P23109 780 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 PHKA2P46019 1235 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 BST1Q10588 318 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 RNASEH2BQ5TBB1 312 aaKnown RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TXNRD3NBQ6F5E7 133 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 USP33Q8TEY7 942 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 CPT1BQ92523 772 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 HPDLQ96IR7 371 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 APOBEC3GQ9HC16 384 aaKnown RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 THEGQ9P2T0 379 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 XPO1O14980 1071 aaKnown RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 MLLT1Q03111 559 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 MGAT5Q09328 741 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM62Q0P6H9 643 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 TBL3Q12788 808 aaKnown RBP11.77□□□□□ -0.53
SMAD9-202ENST00000379826 SH3TC2Q8TF17 1288 aa11.77□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF516Q92618 1163 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms