RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CPSF3Q9UKF6 684 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 NAALADL1Q9UQQ1 740 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 KRBA1A5PL33 1030 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 NFIBO00712 420 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 PHGDHO43175 533 aaKnown RBP12.16□□□□□ -0.46
NPHP4-202ENST00000378161 TM7SF2O76062 418 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 CASP7P55210 303 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 DCAF6Q58WW2 860 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 RAD54LQ92698 747 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 ERGIC2Q96RQ1 377 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 HERC2P3Q9BVR0 1158 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 FANCFQ9NPI8 374 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 IFT172Q9UG01 1749 aa12.16□□□□□ -0.46
NPHP4-202ENST00000378161 PNMA6FA0A0J9YX94 578 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 POTEMA6NI47 508 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 FAM25EA8MYX2 175 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 LPXNO60711 386 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 ASS1P00966 412 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 PRKCBP05771 671 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 HSMCR30P0CW71 290 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 FCER1AP12319 257 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 ARPP19P56211 112 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 MYL7Q01449 175 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 TCP10Q12799 353 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 MESDQ14696 234 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 CORO6Q6QEF8 472 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 PLD3Q8IV08 490 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 NRG4Q8WWG1 115 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 UTP4Q969X6 686 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 TCF12Q99081 682 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 DHRS9Q9BPW9 319 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 NEUROG2Q9H2A3 272 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 NDFIP2Q9NV92 336 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 TAS2R1Q9NYW7 299 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 TNS3Q68CZ2 1445 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 COL15A1P39059 1388 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 GNB5O14775 395 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 NCAM2O15394 837 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 GM2AP17900 193 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 GNA12Q03113 381 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 BFSP1Q12934 665 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 BCL2A1Q16548 175 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 MTERF2Q49AM1 385 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 RAVER1Q8IY67 606 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 PPM1KQ8N3J5 372 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 PDPRQ8NCN5 879 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 EXD1Q8NHP7 514 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 ZNF75CPQ92670 426 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 ALKBH8Q96BT7 664 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 C9orf72Q96LT7 481 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 OR2B2Q9GZK3 357 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 CCDC90BQ9GZT6 254 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 POLR1BQ9H9Y6 1135 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 AGTPBP1Q9UPW5 1226 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 FAM237AA0A1B0GTK4 181 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 GAS2O43903 313 aaKnown RBP12.15□□□□□ -0.46
NPHP4-202ENST00000378161 TRIM23P36406 574 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 CENPCQ03188 943 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 BNIP3Q12983 259 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 INSCQ1MX18 579 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 CLIP4Q8N3C7 705 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
NPHP4-202ENST00000378161 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
NPHP4-202ENST00000378161 TSC22D2O75157 780 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 TOM1L1O75674 476 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 KRT19P08727 400 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ITIH2P19823 946 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ACTR3P61158 418 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 MFSD5Q6N075 450 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 DCP2Q8IU60 420 aaKnown RBP12.14□□□□□ -0.47
NPHP4-202ENST00000378161 LZTR1Q8N653 840 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 GSTCDQ8NEC7 633 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 FIG4Q92562 907 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 HIPK3Q9H422 1215 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 CXorf21Q9HAI6 301 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 COPEO14579 308 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 S100A6P06703 90 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-202ENST00000378161 PUDPQ08623 228 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 TROAPQ12815 778 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 COASYQ13057 564 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 TCHHL1Q5QJ38 904 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-202ENST00000378161 RINT1Q6NUQ1 792 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 C16orf62Q7Z3J2 963 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 HDDC2Q7Z4H3 204 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ZNF598Q86UK7 904 aaKnown RBP12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ANKRD53Q8N9V6 530 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
NPHP4-202ENST00000378161 ASB12Q8WXK4 309 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms