RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 H7C4K7 107 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 KRT8P05787 483 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 CTXN3Q4LDR2 81 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 APTXQ7Z2E3 356 aaKnown RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 LATS2Q9NRM7 1088 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 BLOC1S6Q9UL45 172 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 ADRB2P07550 413 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 HIST1H2AGP0C0S8 130 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-201ENST00000378156 HIST1H2ADP20671 130 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 MAP3K7CLP57077 242 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 MFSD7Q6UXD7 560 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 VCPIP1Q96JH7 1222 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 HIST1H2AHQ96KK5 128 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 HIST1H2AJQ99878 128 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 H2AFJQ9BTM1 129 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 HEY2Q9UBP5 337 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 SALL4Q9UJQ4 1053 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 TSPAN16Q9UKR8 245 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 AP4E1Q9UPM8 1137 aa15.53■□□□□ 0.08
NPHP4-201ENST00000378156 KLHL2O95198 593 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 CCDC159P0C7I6 412 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 AKAP5P24588 427 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 TMED10P49755 219 aaKnown RBP15.52■□□□□ 0.08
NPHP4-201ENST00000378156 CAPRIN1Q14444 709 aaKnown RBP15.52■□□□□ 0.08
NPHP4-201ENST00000378156 MFSD10Q14728 455 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 ZNF410Q86VK4 478 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 HASPINQ8TF76 798 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 CASTOR2A6NHX0 329 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 RAP1GDS1P52306 607 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 TBCCQ15814 346 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 HYIQ5T013 277 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 SOCS4Q8WXH5 440 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 PGM2Q96G03 612 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 RPS6KL1Q9Y6S9 549 aa15.52■□□□□ 0.08
NPHP4-201ENST00000378156 RGPD8O14715 1765 aaPredicted RBP15.52■□□□□ 0.07
NPHP4-201ENST00000378156 LGALS2P05162 132 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 SZRD1Q7Z422 152 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 EIF1ADQ8N9N8 165 aaKnown RBP15.52■□□□□ 0.07
NPHP4-201ENST00000378156 RNF217Q8TC41 542 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 NSL1Q96IY1 281 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 NINJ2Q9NZG7 142 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 MYO1DO94832 1006 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 PYGLP06737 847 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 ITGB5P18084 799 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 AKT1P31749 480 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 RPL10AP62906 217 aaKnown RBP15.52■□□□□ 0.07
NPHP4-201ENST00000378156 RBBP7Q16576 425 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 LRRC8EQ6NSJ5 796 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 MREGQ8N565 214 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 HIC2Q96JB3 615 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 CASZ1Q86V15 1759 aa15.52■□□□□ 0.07
NPHP4-201ENST00000378156 AFDNP55196 1824 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 LOC100653049A0A140TA62 436 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 BTNL10A8MVZ5 291 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 KRT34O76011 436 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 NOL4O94818 638 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 SNHG28P0DPA3 235 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 PECAM1P16284 738 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 SERPINB3P29508 390 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ITGB3BPQ13352 177 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 GPR63Q9BZJ6 419 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 TTYH3Q9C0H2 523 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 GEMIN8Q9NWZ8 242 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 DDX43Q9NXZ2 648 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 LACTBL1A8MY62 500 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 VHLP40337 213 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 TKTL1P51854 596 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 VCPP55072 806 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ZNF177Q13360 481 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ARHGEF7Q14155 803 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 PRELID2Q8N945 189 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 IL31RAQ8NI17 732 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 PURBQ96QR8 312 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 SYT15Q9BQS2 421 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ASMTLO95671 621 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 LRG1P02750 347 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 CDH8P55286 799 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 PTK6Q13882 451 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ZNF268Q14587 947 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 NT5DC4Q86YG4 428 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 DNPEPQ9ULA0 475 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 SLC39A10Q9ULF5 831 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 MYL2P10916 166 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 PSEN2P49810 448 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 ABCE1P61221 599 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 KPNB1Q14974 876 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 CELF3Q5SZQ8 465 aaKnown RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 SHCBP1Q8NEM2 672 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 HES6Q96HZ4 224 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 KIF17Q9P2E2 1029 aa15.51■□□□□ 0.07
NPHP4-201ENST00000378156 TIMM13Q9Y5L4 95 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-201ENST00000378156 GHRP10912 638 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 TGM2P21980 687 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 HMOX2P30519 316 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 AXLP30530 894 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 ATN1P54259 1190 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-201ENST00000378156 GTF2BQ00403 316 aa15.5■□□□□ 0.07
NPHP4-201ENST00000378156 SKIV2LQ15477 1246 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms