RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ANO5Q75V66 913 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 OR5B17Q8NGF7 314 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 DCUN1D1Q96GG9 259 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 ZNF778Q96MU6 729 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 XPNPEP1Q9NQW7 623 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 PNPOQ9NVS9 261 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 TTLL3Q9Y4R7 772 aa16.46■□□□□ 0.23
CKAP4-201ENST00000378026 CDK4P11802 303 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 AOC1P19801 751 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 MAGEA10P43363 369 aaPredicted RBP16.45■□□□□ 0.22
CKAP4-201ENST00000378026 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 TRMT10BQ6PF06 316 aaKnown RBP16.45■□□□□ 0.22
CKAP4-201ENST00000378026 KIAA0319LQ8IZA0 1049 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 TTC13Q8NBP0 860 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 MAN1C1Q9NR34 630 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 TDRKHQ9Y2W6 561 aaKnown RBP16.45■□□□□ 0.22
CKAP4-201ENST00000378026 ZNF536O15090 1300 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 H0YIN7 160 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
CKAP4-201ENST00000378026 IL1BP01584 269 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 CALB1P05937 261 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 TMEM259Q4ZIN3 620 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 FRMD7Q6ZUT3 714 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 ARFGAP1Q8N6T3 406 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 AGR3Q8TD06 166 aa16.45■□□□□ 0.22
CKAP4-201ENST00000378026 MRPL1Q9BYD6 325 aaKnown RBP16.45■□□□□ 0.22
CKAP4-201ENST00000378026 F5H423 210 aaPredicted RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 CCNT2O60583 730 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 LRCH4O75427 683 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 APRTP07741 180 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 GMPRP36959 345 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 DUS1LQ6P1R4 473 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 BBS12Q6ZW61 710 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 MIPOL1Q8TD10 442 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 HSPBAP1Q96EW2 488 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 LIN28AQ9H9Z2 209 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 NDUFA13Q9P0J0 144 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 SLC17A6Q9P2U8 582 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 TESPA1A2RU30 521 aaPredicted RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 TTLL13PA6NNM8 815 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 H3BSA7 217 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 DCXO43602 365 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 HSPA1LP34931 641 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 MRPS9P82933 396 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 TBCCQ15814 346 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 LGSNQ5TDP6 509 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 ANGEL2Q5VTE6 544 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 KLC3Q6P597 504 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 PHTF2Q8N3S3 785 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 RNF148Q8N7C7 305 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 PIWIL2Q8TC59 973 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 THAP1Q9NVV9 213 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 CCPG1Q9ULG6 757 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 CCNE2O96020 404 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 SRGAP2BP0DMP2 458 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 CD1EP15812 388 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 ITGAXP20702 1163 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 YWHAZP63104 245 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 WASHC5Q12768 1159 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 CYLC2Q14093 348 aaPredicted RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 C6orf52Q5T4I8 152 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 PPP1R36Q96LQ0 422 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 RBAKQ9NYW8 714 aaPredicted RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 AGO2Q9UKV8 859 aaKnown RBP16.44■□□□□ 0.22
CKAP4-201ENST00000378026 ZNF711Q9Y462 761 aa16.44■□□□□ 0.22
CKAP4-201ENST00000378026 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 GREB1LQ9C091 1923 aaPredicted RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 A0A1B0GTW7 788 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 H3BNX3 289 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 DNAJA2O60884 412 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 SNNO75324 88 aaPredicted RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 ROR1Q01973 937 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 ITGA9Q13797 1035 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 PDPK2PQ6A1A2 396 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 CCDC33Q8N5R6 958 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 TTLL6Q8N841 843 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 CATSPER2Q96P56 530 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 ZNF510Q9Y2H8 683 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 RBBP6Q7Z6E9 1792 aaKnown RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 RGL2O15211 777 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 EXTL3O43909 919 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 KRT3P12035 628 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 NELFEP18615 380 aaKnown RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 SLC1A6P48664 564 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 MRPS22P82650 360 aaKnown RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 SLC25A11Q02978 314 aaKnown RBP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 ORC1Q13415 861 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 SNAPC2Q13487 334 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 TUBB3Q13509 450 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 CYTH1Q15438 398 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 ADGRF2Q8IZF7 708 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 UNC5BQ8IZJ1 945 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 WDTC1Q8N5D0 677 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms