RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 MROH9Q5TGP6 573 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 TRIM67Q6ZTA4 783 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 POPDC2Q9HBU9 364 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 RRN3Q9NYV6 651 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 RGS20O76081 388 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 CYBBP04839 570 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ZSCAN5DPP0CG00 497 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 TGM2P21980 687 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 NUMBP49757 651 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 RAD51Q06609 339 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 ITGA7Q13683 1181 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 SLC10A6Q3KNW5 377 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 FASTKD1Q53R41 847 aaKnown RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 C9orf57Q5W0N0 161 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 PTPRN2Q92932 1015 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 BHMTQ93088 406 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 GRAMD1AQ96CP6 724 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 PSD3Q9NYI0 1048 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 NOCTQ9UK39 431 aaKnown RBP15.03■□□□□ -0
TCOF1-202ENST00000377797 COG5Q9UP83 839 aa15.03■□□□□ -0
TCOF1-202ENST00000377797 TIAM2Q8IVF5 1701 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 UNCXA6NJT0 531 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 RASSF10A6NK89 507 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 TRIM49D1C9J1S8 452 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 BAG2O95816 211 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 CCR1P32246 355 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 UGP2Q16851 508 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 ASTE1Q2TB18 679 aaPredicted RBP15.02■□□□□ -0
TCOF1-202ENST00000377797 PDCD7Q8N8D1 485 aaKnown RBP15.02■□□□□ -0
TCOF1-202ENST00000377797 APOL2Q9BQE5 337 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 CEP41Q9BYV8 373 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 APOBEC2Q9Y235 224 aaKnown RBP15.02■□□□□ -0
TCOF1-202ENST00000377797 TMEM191CA6NGB0 347 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 SLC39A12Q504Y0 691 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 JOSD2Q8TAC2 188 aa15.02■□□□□ -0
TCOF1-202ENST00000377797 LGR5O75473 907 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 NOS2P35228 1153 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 SLC11A2P49281 568 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 SESN3P58005 492 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 KDM7AQ6ZMT4 941 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 SPATA21Q7Z572 469 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 ZNF516Q92618 1163 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 FBXL18Q96ME1 805 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 CPXM1Q96SM3 734 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 SENP6Q9GZR1 1112 aaPredicted RBP15.02□□□□□ -0.01
TCOF1-202ENST00000377797 DERAQ9Y315 318 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 MYO1CO00159 1063 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 ANXA9O76027 345 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 SPRP35270 261 aaPredicted RBP15.02□□□□□ -0.01
TCOF1-202ENST00000377797 CRHR2Q13324 411 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 CELF6Q96J87 481 aaKnown RBP15.02□□□□□ -0.01
TCOF1-202ENST00000377797 YME1L1Q96TA2 773 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 AAASQ9NRG9 546 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 NUDT5Q9UKK9 219 aa15.02□□□□□ -0.01
TCOF1-202ENST00000377797 GOLGA8QA0A0J9YX86 632 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 GOLGA8OA6NCC3 632 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 GOLGA8NF8WBI6 632 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 KCNK1O00180 336 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 RIPK2O43353 540 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 CILPO75339 1184 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 KRT4P19013 534 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 KCNT2Q6UVM3 1135 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 ZNF467Q7Z7K2 595 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-202ENST00000377797 PCYOX1Q9UHG3 505 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 PIGRP01833 764 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 URODP06132 367 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 DNAJB2P25686 324 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 USP10Q14694 798 aaKnown RBP15.01□□□□□ -0.01
TCOF1-202ENST00000377797 SLC39A4Q6P5W5 647 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 LRRC57Q8N9N7 239 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 FBXO44Q9H4M3 255 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 GIT1Q9Y2X7 761 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 FSCN2O14926 492 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 CA12O43570 354 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 PTK6Q13882 451 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 PLEKHA7Q6IQ23 1121 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 WNT8BQ93098 351 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 LHX5Q9H2C1 402 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 MINDY3Q9H8M7 445 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 FGFR1OP2Q9NVK5 253 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 GTSE1Q9NYZ3 720 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 GGT7Q9UJ14 662 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 ZFP69BQ9UJL9 534 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 SLC45A1Q9Y2W3 748 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 SH3BP1Q9Y3L3 701 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 ABCA3Q99758 1704 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 LRP5O75197 1615 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 SDR42E2A6NKP2 422 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 O00370 1275 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 MAP2K7O14733 419 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 RAG1P15918 1043 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 KCNA10Q16322 511 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 LVRNQ6Q4G3 990 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 TAS2R42Q7RTR8 314 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 EFHBQ8N7U6 833 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 COLGALT1Q8NBJ5 622 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 CAPNS2Q96L46 248 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 PPP1R2P1Q96PQ5 205 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms