RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 C11orf63Q6NUN7 778 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 NYAP1Q6ZVC0 841 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 RSRC2Q7L4I2 434 aaKnown RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 SCD5Q86SK9 330 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 LRCH3Q96II8 777 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 CDCA3Q99618 268 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 CORO1BQ9BR76 489 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ABCC13Q9NSE7 274 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 LCMT1Q9UIC8 334 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 STAP1Q9ULZ2 295 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ALG6Q9Y672 507 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-203ENST00000377344 XYLBO75191 536 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 FYNP06241 537 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 COMTP21964 271 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 NOS2P35228 1153 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 SULT1E1P49888 294 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-203ENST00000377344 CCDC14Q49A88 953 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 SYT10Q6XYQ8 523 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 ARCQ7LC44 396 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 PEX26Q7Z412 305 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 PDZD8Q8NEN9 1154 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 FNIP1Q8TF40 1166 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 HDAC7Q8WUI4 952 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 TRMT2BQ96GJ1 504 aaKnown RBP13.54□□□□□ -0.24
CBWD3-203ENST00000377344 MYRFLQ96LU7 910 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 SLC2A13Q96QE2 648 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 WDR24Q96S15 920 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
CBWD3-203ENST00000377344 OSER1Q9NX31 292 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 TRPM5Q9NZQ8 1165 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 DNAI1Q9UI46 699 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 MTCL1Q9Y4B5 1905 aaKnown RBP13.54□□□□□ -0.24
CBWD3-203ENST00000377344 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
CBWD3-203ENST00000377344 CCDC195A0A1B0GUA6 201 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ENC1O14682 589 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 RNF8O76064 485 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 HNRNPA1P09651 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 RALAP11233 206 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 PSEN1P49768 467 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 DNA2P51530 1060 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ETF1P62495 437 aaKnown RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 SH3PXD2AQ5TCZ1 1133 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 POTEHQ6S545 545 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 CPNE8Q86YQ8 564 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 FAM172AQ8WUF8 416 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 CASP10Q92851 521 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF334Q9HCZ1 680 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ZDHHC7Q9NXF8 308 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 PACSIN2Q9UNF0 486 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 MYO9BQ13459 2157 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF638Q14966 1978 aaKnown RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 M0QYT0 321 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 DPYSL4O14531 572 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 MYL4P12829 197 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 RARGP13631 454 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 TFE3P19532 575 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 HOXA9P31269 272 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 SLC1A1P43005 524 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 PTPN9P43378 593 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 HYAL1Q12794 435 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 NME3Q13232 169 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 SLC25A52Q3SY17 297 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 CC2D1AQ6P1N0 951 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-203ENST00000377344 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 OVCA2Q8WZ82 227 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 TBCBQ99426 244 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 NACA2Q9H009 215 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 FAM204AQ9H8W3 233 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 PIDD1Q9HB75 910 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF840PA6NDX5 716 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 KIF2AO00139 706 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-203ENST00000377344 NCK2O43639 380 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 SRGAP2BP0DMP2 458 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 PTPN2P17706 415 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 GABRR2P28476 465 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 CASQ1P31415 396 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 GJC1P36383 396 aa13.52□□□□□ -0.25
CBWD3-203ENST00000377344 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-203ENST00000377344 PABPC1LQ4VXU2 614 aaKnown RBP13.52□□□□□ -0.25
CBWD3-203ENST00000377344 DNTTIP2Q5QJE6 756 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms