RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LSMEM2Q8N112 164 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 LINC00469Q8N7U9 141 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 EXD1Q8NHP7 514 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 JPH1Q9HDC5 661 aaPredicted RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 TOPORSQ9NS56 1045 aaPredicted RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 NDFIP2Q9NV92 336 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 GIN1Q9NXP7 522 aa16.1■□□□□ 0.17
FXN-201ENST00000377270 CRNNQ9UBG3 495 aaPredicted RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 SEPT9Q9UHD8 586 aaPredicted RBP16.1■□□□□ 0.17
FXN-201ENST00000377270 NDC80O14777 642 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 KCNJ13O60928 360 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 PIM1P11309 404 aaPredicted RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 CHRNB2P17787 502 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 RPL5P46777 297 aaKnown RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 CDC16Q13042 620 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 MOGSQ13724 837 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 SLC39A4Q6P5W5 647 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 DCDC5Q6ZRR9 648 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 USP43Q70EL4 1123 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 NATD1Q8N6N6 113 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 PRELID2Q8N945 189 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 ELMO3Q96BJ8 720 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 EFHD2Q96C19 240 aaPredicted RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 TMEM8AQ9HCN3 771 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 UVRAGQ9P2Y5 699 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 SLC9A2Q9UBY0 812 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 STK39Q9UEW8 545 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 KLHL3Q9UH77 587 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 ADAMTS5Q9UNA0 930 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 DNAJC16Q9Y2G8 782 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 ADGRA3Q8IWK6 1321 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 FZD9O00144 591 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 CLASP2O75122 1294 aaKnown RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 DLATP10515 647 aaKnown RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 ESRRAP11474 423 aaPredicted RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 CLVS1Q8IUQ0 354 aaPredicted RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 EME1Q96AY2 570 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 PSKH2Q96QS6 385 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 MIPEPQ99797 713 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 CTRCQ99895 268 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 TEX13BQ9BXU2 312 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 C17orf75Q9HAS0 396 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 NOCTQ9UK39 431 aaKnown RBP16.09■□□□□ 0.17
FXN-201ENST00000377270 IKBKGQ9Y6K9 419 aa16.09■□□□□ 0.17
FXN-201ENST00000377270 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.17
FXN-201ENST00000377270 HAUS5O94927 633 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 SMIM18P0DKX4 95 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 ACTR2P61160 394 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 TTC27Q6P3X3 843 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 TTC23LQ6PF05 361 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 CCDC137Q6PK04 289 aaKnown RBP16.08■□□□□ 0.17
FXN-201ENST00000377270 METTL25Q8N6Q8 603 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 TAS1R2Q8TE23 839 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 SHC3Q92529 594 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 ALG3Q92685 438 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 C12orf42Q96LP6 360 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 PALMDQ9NP74 551 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 PHTF1Q9UMS5 762 aa16.08■□□□□ 0.17
FXN-201ENST00000377270 DOCK1Q14185 1865 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 MAGEB2O15479 319 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 HNRNPCL1O60812 293 aaKnown RBP16.08■□□□□ 0.16
FXN-201ENST00000377270 TRPA1O75762 1119 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 DGAT1O75907 488 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 TFAP2AP05549 437 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 KRT4P19013 534 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 CRABP2P29373 138 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 CDR2Q01850 454 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 PRKCEQ02156 737 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 MED21Q13503 144 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 ACAP1Q15027 740 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 DCAF6Q58WW2 860 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 LSMEM1Q8N8F7 131 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 FBXL13Q8NEE6 735 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 MCPH1Q8NEM0 835 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 MFSD14AQ96MC6 490 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 IFT122Q9HBG6 1241 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 ZFYVE28Q9HCC9 887 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 XPNPEP1Q9NQW7 623 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 CYP26B1Q9NR63 512 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 RAB20Q9NX57 234 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 ANGPTL2Q9UKU9 493 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 COQ4Q9Y3A0 265 aa16.08■□□□□ 0.16
FXN-201ENST00000377270 COL11A1P12107 1806 aaPredicted RBP16.07■□□□□ 0.16
FXN-201ENST00000377270 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
FXN-201ENST00000377270 A6NL46 340 aa16.07■□□□□ 0.16
FXN-201ENST00000377270 K7EPI3 171 aa16.07■□□□□ 0.16
FXN-201ENST00000377270 ZBTB11O95625 1053 aaPredicted RBP16.07■□□□□ 0.16
FXN-201ENST00000377270 STAMBPO95630 424 aa16.07■□□□□ 0.16
FXN-201ENST00000377270 CRYZL1O95825 349 aa16.07■□□□□ 0.16
FXN-201ENST00000377270 FYNP06241 537 aa16.07■□□□□ 0.16
FXN-201ENST00000377270 ABCB1P08183 1280 aaPredicted RBP16.07■□□□□ 0.16
FXN-201ENST00000377270 CTNNA2P26232 953 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms