RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SMIM10L2AP0DMW4 78 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 SMIM10L2BP0DMW5 78 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 RPL10AP62906 217 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 ASPHQ12797 758 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 BOLA3Q53S33 107 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 ERMARDQ5T6L9 678 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 SLC27A1Q6PCB7 646 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 MON1BQ7L1V2 547 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 SPATS2Q86XZ4 545 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 MTMR14Q8NCE2 650 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 ULBP1Q9BZM6 244 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 WDCPQ9H6R7 721 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 HEY2Q9UBP5 337 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 WDR27A2RRH5 827 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 TADA2AO75478 443 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 GPC4O75487 556 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SMPD1P17405 629 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SP100P23497 879 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 TSPY1Q01534 308 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 TAP1Q03518 808 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 MFSD10Q14728 455 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 POU6F1Q14863 301 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 RPS6KA2Q15349 733 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 ZDHHC24Q6UX98 284 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SLFN11Q7Z7L1 901 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 NTPCRQ9BSD7 190 aaKnown RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 C20orf96Q9NUD7 363 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SLC17A6Q9P2U8 582 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 UNGP13051 313 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 RAD23BP54727 409 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 OLIG2Q13516 323 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 CA9Q16790 459 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 RASGEF1CQ8N431 466 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SERPINB12Q96P63 405 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 KCNK16Q96T55 309 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 RHOBTB2Q9BYZ6 727 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 PCYOX1Q9UHG3 505 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 CPSF3Q9UKF6 684 aaKnown RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 TCRBV7S3A2A0A539 114 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SPDYE5A6NIY4 337 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 NSUN2Q08J23 767 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 SPATA2LQ8IUW3 424 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 POU5F2Q8N7G0 328 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 RAET1EQ8TD07 263 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 ALKBH8Q96BT7 664 aaKnown RBP11.54□□□□□ -0.56
HDAC6-203ENST00000376619 B3GALT6Q96L58 329 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 STXBP5LQ9Y2K9 1186 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 RPTORQ8N122 1335 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 CNTNAP2Q9UHC6 1331 aa11.54□□□□□ -0.56
HDAC6-203ENST00000376619 H3BRJ5 948 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 THP07101 528 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 ERVK-10P10266 1014 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 DNAJB2P25686 324 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PMLP29590 882 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PBX3P40426 434 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 C1QTNF8P60827 252 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 DPYSL3Q14195 570 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PRPSAP1Q14558 356 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 TAF11Q15544 211 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 COLGALT1Q8NBJ5 622 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 CYP4F12Q9HCS2 524 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 NFASCO94856 1347 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 hCG_1818297A0A087WSY0 165 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 MGAT1P26572 445 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 GRIA1P42261 906 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PTGIRP43119 386 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 CSE1LP55060 971 aaKnown RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 KCNJ2P63252 427 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 MMEL1Q495T6 779 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 HSP90AA5PQ58FG0 334 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 ICE2Q659A1 982 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 DEFB128Q7Z7B8 93 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 UNC5BQ8IZJ1 945 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 RNF148Q8N7C7 305 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 NUDCD1Q96RS6 583 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 MANSC1Q9H8J5 431 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 TNFSF13BQ9Y275 285 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 SSX2IPQ9Y2D8 614 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 IQCF3P0C7M6 154 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 CNGA2Q16280 664 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 FSCN1Q16658 493 aaKnown RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 MFSD14CQ5VZR4 134 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 CYB5D1Q6P9G0 228 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 CDKL3Q8IVW4 592 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 SLC4A11Q8NBS3 891 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 SENP8Q96LD8 212 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 LRRC19Q9H756 370 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PFDN4Q9NQP4 134 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 SIGLEC16A6NMB1 481 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms