RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 HDAC7Q8WUI4 952 aa22.14■■□□□ 1.13
HLA-C-201ENST00000376228 KHSRPQ92945 711 aaKnown RBP eCLIP22.14■■□□□ 1.13
HLA-C-201ENST00000376228 RUNDC3BQ96NL0 473 aa22.14■■□□□ 1.13
HLA-C-201ENST00000376228 RTP3Q9BQQ7 232 aa22.14■■□□□ 1.13
HLA-C-201ENST00000376228 GDF3Q9NR23 364 aa22.14■■□□□ 1.13
HLA-C-201ENST00000376228 STK39Q9UEW8 545 aa22.14■■□□□ 1.13
HLA-C-201ENST00000376228 NR2E1Q9Y466 385 aa22.14■■□□□ 1.13
HLA-C-201ENST00000376228 MBTPS2O43462 519 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 RAD51CO43502 376 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 PHF2O75151 1096 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 LRCH4O75427 683 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 KRT7P08729 469 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 CHRNA3P32297 505 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 BRCC3P46736 316 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 GLUD2P49448 558 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 SIX1Q15475 284 aaPredicted RBP22.13■■□□□ 1.13
HLA-C-201ENST00000376228 HADHQ16836 314 aaKnown RBP22.13■■□□□ 1.13
HLA-C-201ENST00000376228 MAP9Q49MG5 647 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 MDH1BQ5I0G3 518 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 ARFGAP1Q8N6T3 406 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 PRELID2Q8N945 189 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 B3GNT5Q9BYG0 378 aa22.13■■□□□ 1.13
HLA-C-201ENST00000376228 DDX47Q9H0S4 455 aaKnown RBP22.13■■□□□ 1.13
HLA-C-201ENST00000376228 LILRB3O75022 631 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 RNF8O76064 485 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 CNPP09543 421 aaKnown RBP22.12■■□□□ 1.13
HLA-C-201ENST00000376228 EPCAMP16422 314 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 SLC25A11Q02978 314 aaKnown RBP22.12■■□□□ 1.13
HLA-C-201ENST00000376228 DHX34Q14147 1143 aaKnown RBP22.12■■□□□ 1.13
HLA-C-201ENST00000376228 BEND6Q5SZJ8 279 aaPredicted RBP22.12■■□□□ 1.13
HLA-C-201ENST00000376228 DAB2IPQ5VWQ8 1189 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 KIAA1841Q6NSI8 718 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 IFT20Q8IY31 132 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 ZDHHC14Q8IZN3 488 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 EMC1Q8N766 993 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 RXFP2Q8WXD0 754 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 KLHL5Q96PQ7 755 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 PKMYT1Q99640 499 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 PCYOX1Q9UHG3 505 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 EFR3BQ9Y2G0 817 aa22.12■■□□□ 1.13
HLA-C-201ENST00000376228 TIMM13Q9Y5L4 95 aaPredicted RBP22.12■■□□□ 1.13
HLA-C-201ENST00000376228 SF3B1O75533 1304 aaKnown RBP eCLIP22.12■■□□□ 1.13
HLA-C-201ENST00000376228 HEXIM1O94992 359 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 FAM200BP0CF97 657 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SRGAP2BP0DMP2 458 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 KLF1Q13351 362 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SMAD4Q13485 552 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 MAPRE1Q15691 268 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 PUS10Q3MIT2 529 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 INTS6LQ5JSJ4 861 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 ANKRD54Q6NXT1 300 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 CLEC20AQ6ZU45 233 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 PIGZQ86VD9 579 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SCUBE3Q8IX30 993 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 THEM5Q8N1Q8 247 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SMRP1Q8NCR6 262 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 EMILIN2Q9BXX0 1053 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 LRRC19Q9H756 370 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 ZNF446Q9NWS9 450 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 MYBPHLA2RUH7 354 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 FAM187AA6NFU0 413 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 TRAPPC3O43617 180 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 GLI1P08151 1106 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 RARAP10276 462 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 PDGFRAP16234 1089 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 KLRC2P26717 231 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SSR1P43307 286 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 PTPN9P43378 593 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 FNTAP49354 379 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SLC7A5Q01650 507 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 DSG1Q02413 1049 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 USP41Q3LFD5 358 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 EFHC1Q5JVL4 640 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 RTP2Q5QGT7 225 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 OVOS1Q6IE37 1185 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 TRNP1Q6NT89 227 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 TMEM184AQ6ZMB5 413 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 FAM35AQ86V20 835 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 CEP57Q86XR8 500 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 RIN2Q8WYP3 895 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 SEC14L1Q92503 715 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 CASP10Q92851 521 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 PCED1BQ96HM7 432 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 PIWIL1Q96J94 861 aaKnown RBP22.11■■□□□ 1.13
HLA-C-201ENST00000376228 OSBPL8Q9BZF1 889 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 CSNK1G1Q9HCP0 422 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 CHST7Q9NS84 486 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 HOMER3Q9NSC5 361 aa22.11■■□□□ 1.13
HLA-C-201ENST00000376228 CUL9Q8IWT3 2517 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 TEX28O15482 410 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 TCF4P15884 667 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 RPL17P18621 184 aaKnown RBP22.1■■□□□ 1.13
HLA-C-201ENST00000376228 FLT3P36888 993 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 TAZQ16635 292 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 FAM171A1Q5VUB5 890 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 SYCE2Q6PIF2 218 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 PRSS55Q6UWB4 352 aaPredicted RBP22.1■■□□□ 1.13
HLA-C-201ENST00000376228 SMARCD1Q96GM5 515 aa22.1■■□□□ 1.13
HLA-C-201ENST00000376228 SLITRK1Q96PX8 696 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms