RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PBX2P40425 430 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 SSR1P43307 286 aaKnown RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 ERVFC1P60507 584 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 ERVK-21P61565 698 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 ATP11AP98196 1134 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 ZNF211Q13398 564 aaPredicted RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 DCAF6Q58WW2 860 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 LRRC38Q5VT99 294 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 PLPP4Q5VZY2 271 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 TXNRD3NBQ6F5E7 133 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 DENND5BQ6ZUT9 1274 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CYP4V2Q6ZWL3 525 aaPredicted RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 TMC7Q7Z402 723 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 POLNQ7Z5Q5 900 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 KATNAL2Q8IYT4 538 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CENPIQ92674 756 aaPredicted RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 NT5C3BQ969T7 300 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 MS4A14Q96JA4 679 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 PBKQ96KB5 322 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 TGS1Q96RS0 853 aaKnown RBP10.93□□□□□ -0.66
PDPN-203ENST00000376061 PEBP4Q96S96 227 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 TBCBQ99426 244 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 NPY6RQ99463 290 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CARD6Q9BX69 1037 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 FBXO44Q9H4M3 255 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 CYP4F11Q9HBI6 524 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 SLC24A3Q9HC58 644 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 TLR9Q9NR96 1032 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 KLHL11Q9NVR0 708 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 SMARCAL1Q9NZC9 954 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 IL37Q9NZH6 218 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.93□□□□□ -0.66
PDPN-203ENST00000376061 IRAK3Q9Y616 596 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 ANAPC1Q9H1A4 1944 aa10.93□□□□□ -0.66
PDPN-203ENST00000376061 FAM92AA1XBS5 289 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 SLC38A8A6NNN8 435 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 HIDE1A8MVS5 230 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 PRRG1O14668 218 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 FSCN2O14926 492 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 CEP104O60308 925 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 RTN3O95197 1032 aaPredicted RBP10.92□□□□□ -0.66
PDPN-203ENST00000376061 CXCL14O95715 111 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 ADH1AP07327 375 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 DESP17661 470 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 IL1R2P27930 398 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 NOS2P35228 1153 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 TUFMP49411 452 aaKnown RBP10.92□□□□□ -0.66
PDPN-203ENST00000376061 PGFP49763 221 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 SULT1E1P49888 294 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 HDAC4P56524 1084 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 RWDD2BP57060 319 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDPN-203ENST00000376061 CKAP4Q07065 602 aaKnown RBP10.92□□□□□ -0.66
PDPN-203ENST00000376061 MTMR3Q13615 1198 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 CAMK1Q14012 370 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 SMC1AQ14683 1233 aaKnown RBP10.92□□□□□ -0.66
PDPN-203ENST00000376061 SLC25A52Q3SY17 297 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 SYPL2Q5VXT5 272 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 BSPRYQ5W0U4 402 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 AADACL2Q6P093 401 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 BEND5Q7L4P6 421 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 STRADAQ7RTN6 431 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 ZNF572Q7Z3I7 529 aaPredicted RBP10.92□□□□□ -0.66
PDPN-203ENST00000376061 BNIPLQ7Z465 357 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 SCD5Q86SK9 330 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 TCEAL8Q8IYN2 117 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 RASGEF1CQ8N431 466 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 GIPC2Q8TF65 315 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 EDEM1Q92611 657 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 ACSF2Q96CM8 615 aaPredicted RBP10.92□□□□□ -0.66
PDPN-203ENST00000376061 KLHL5Q96PQ7 755 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 TRIM62Q9BVG3 475 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 TTLL2Q9BWV7 592 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 PBX4Q9BYU1 374 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 ZWILCHQ9H900 591 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 NMUR1Q9HB89 426 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 COMMD8Q9NX08 183 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 GMIPQ9P107 970 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 MAFFQ9ULX9 164 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 STAP1Q9ULZ2 295 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 INSL5Q9Y5Q6 135 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 DENND4CQ5VZ89 1909 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
PDPN-203ENST00000376061 A0A1W2PQH9 124 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 C2orf71A6NGG8 1288 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 PGRMC1O00264 195 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 CAPN9O14815 690 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 TGM5O43548 720 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 SLU7O95391 586 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 KRT1P04264 644 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 KRT7P08729 469 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms