RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ACBD6Q9BR61 282 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ROPN1BQ9BZX4 212 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PHACTR1Q9C0D0 580 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ROPN1Q9HAT0 212 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TIMM13Q9Y5L4 95 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 APOL1O14791 398 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 AP1G2O75843 785 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 B3GAT3O94766 335 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RBP3P10745 1247 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NOS2P35228 1153 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 YWHAZP63104 245 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FAM189BP81408 668 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CA9Q16790 459 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 C6orf118Q5T5N4 469 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 UBAP2Q5T6F2 1119 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FAM171BQ6P995 826 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SLC24A5Q71RS6 500 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DEFB106AQ8N104 65 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RSAD2Q8WXG1 361 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 P3H4Q92791 437 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SMARCD1Q96GM5 515 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CAPS2Q9BXY5 557 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CENPHQ9H3R5 247 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 LRRC4CQ9HCJ2 640 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 GPATCH2LQ9NWQ4 482 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FARP1Q9Y4F1 1045 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ARVCFO00192 962 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SMAPO00193 183 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 STIP1P31948 543 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 L1CAMP32004 1257 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 GRK4P32298 578 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 GDF10P55107 478 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MAP3K7CLP57077 242 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ROR1Q01973 937 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 OTUD1Q5VV17 481 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RTN4RL1Q86UN2 441 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PLD5Q8N7P1 536 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ZMIZ2Q8NF64 920 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PCDH19Q8TAB3 1148 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 LINC01599Q8WXQ3 324 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RSPH1Q8WYR4 309 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SUSD3Q96L08 255 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NPY6RQ99463 290 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PKMYT1Q99640 499 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CSNK1G1Q9HCP0 422 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NINJ2Q9NZG7 142 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RCOR3Q9P2K3 495 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 AP4E1Q9UPM8 1137 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 INPP5FQ9Y2H2 1132 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TANC1Q9C0D5 1861 aa18.75■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 IFNB1P01574 187 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ABHD2P08910 425 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TYMPP19971 482 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RDXP35241 583 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ACTN2P35609 894 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SULT1E1P49888 294 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TKTL1P51854 596 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DAOAP59103 153 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 INTS6LQ5JSJ4 861 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MFSD5Q6N075 450 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FAM43BQ6ZT52 329 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 UNC45BQ8IWX7 931 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PRCCQ92733 491 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FAM149B1Q96BN6 582 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RBM15Q96T37 977 aaKnown RBP eCLIP18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PRDM16Q9HAZ2 1276 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 POPDC2Q9HBU9 364 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MTMR10Q9NXD2 777 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 STAP1Q9ULZ2 295 aa18.74■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CFAP69A5D8W1 941 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 HHLA1C9JL84 531 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TCEA3O75764 348 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ZFXP17010 805 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RPL22P35268 128 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 BRCC3P46736 316 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 DNAJC21Q5F1R6 531 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TNFAIP8L3Q5GJ75 292 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 GLB1LQ6UWU2 654 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NPNTQ6UXI9 565 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PPIL6Q8IXY8 311 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MYLPFQ96A32 169 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RTP4Q96DX8 246 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FTHL17Q9BXU8 183 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NRDE2Q9H7Z3 1164 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SAGE1Q9NXZ1 904 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CALCOCO1Q9P1Z2 691 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NOVA2Q9UNW9 492 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MYO16Q9Y6X6 1858 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 KBTBD13C9JR72 458 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TMEM189-UBE2V1I3L0A0 370 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ACSL3O95573 720 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 AGTP01019 485 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 COL6A1P12109 1028 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 CYP2F1P24903 491 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 NDUFV1P49821 464 aa18.73■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ATXN1P54253 815 aaKnown RBP18.73■□□□□ 0.59
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