RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 WASHC5Q12768 1159 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 NAT8LQ8N9F0 302 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 TSPAN14Q8NG11 270 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 LRGUKQ96M69 825 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 XPNPEP1Q9NQW7 623 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 HERC5Q9UII4 1024 aaKnown RBP21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 ITGA11Q9UKX5 1188 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 PADI4Q9UM07 663 aa21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 FAM32AQ9Y421 112 aaKnown RBP21.33■■□□□ 1.01
TMEFF1-201ENST00000374879 TRIM49D1C9J1S8 452 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 ATP5BP06576 529 aaKnown RBP21.33■■□□□ 1
TMEFF1-201ENST00000374879 ZNF23P17027 643 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 RARS2Q5T160 578 aaKnown RBP21.33■■□□□ 1
TMEFF1-201ENST00000374879 TMEM110Q86TL2 294 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 GRIN3AQ8TCU5 1115 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 FAM20AQ96MK3 541 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 MMP19Q99542 508 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 TRIM17Q9Y577 477 aa21.33■■□□□ 1
TMEFF1-201ENST00000374879 TCRBV9S1A1TA0A576 114 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 DDTLA6NHG4 134 aaPredicted RBP21.32■■□□□ 1
TMEFF1-201ENST00000374879 XPO1O14980 1071 aaKnown RBP21.32■■□□□ 1
TMEFF1-201ENST00000374879 TBC1D12O60347 775 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 SNNO75324 88 aaPredicted RBP21.32■■□□□ 1
TMEFF1-201ENST00000374879 PAX3P23760 479 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 SYCP2LQ5T4T6 812 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 SLC2A7Q6PXP3 512 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 HSPH1Q92598 858 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 AGAP3Q96P47 875 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 RANBP9Q96S59 729 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 HSD17B14Q9BPX1 270 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 NEURL2Q9BR09 285 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 SLC38A7Q9NVC3 462 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 NYAP2Q9P242 653 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 NR2E3Q9Y5X4 410 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 E7ESA3 106 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 CHMP2AO43633 222 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 SIN3BO75182 1162 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 KLHL2O95198 593 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 FUCA1P04066 466 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 GDF10P55107 478 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 ITGA7Q13683 1181 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 PCGF5Q86SE9 256 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 TICAM1Q8IUC6 712 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 MYPNQ86TC9 1320 aa21.32■■□□□ 1
TMEFF1-201ENST00000374879 GOLGA8IPA6NC78 632 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 GOLGA8JA6NMD2 632 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 LSM1O15116 133 aaKnown RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 TMEM63AO94886 807 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 OCM2P0CE71 109 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 OCMP0CE72 109 aaPredicted RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 BCAP31P51572 246 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 SLC5A3P53794 718 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 NUP107P57740 925 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 NANOGNBQ7Z5D8 188 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 TFB1MQ8WVM0 346 aaKnown RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 ACSF2Q96CM8 615 aaPredicted RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 HEPHQ9BQS7 1158 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 STRA6Q9BX79 667 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 AMNQ9BXJ7 453 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 RAB20Q9NX57 234 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 SAE1Q9UBE0 346 aaPredicted RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 ITGAVP06756 1048 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 ALDH3B2P48448 385 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 TMED10P49755 219 aaKnown RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 IKQ13123 557 aaPredicted RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 BCL2A1Q16548 175 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 ZNF423Q2M1K9 1284 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 DCDC5Q6ZRR9 648 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 FRMD7Q6ZUT3 714 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 RCOR2Q8IZ40 523 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 SNX27Q96L92 541 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 TRIM56Q9BRZ2 755 aaKnown RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 PAIP1Q9H074 479 aaKnown RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 KLC2Q9H0B6 622 aa21.31■■□□□ 1
TMEFF1-201ENST00000374879 COPS7BQ9H9Q2 264 aaPredicted RBP21.31■■□□□ 1
TMEFF1-201ENST00000374879 SPTLC1O15269 473 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 KRT1P04264 644 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 TAL1P17542 331 aaPredicted RBP21.3■■□□□ 1
TMEFF1-201ENST00000374879 NFKBIAP25963 317 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 ADGRE1Q14246 886 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 MYBPC2Q14324 1141 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 FASTKD5Q7L8L6 764 aaKnown RBP21.3■■□□□ 1
TMEFF1-201ENST00000374879 SIAH1Q8IUQ4 282 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 ZNF778Q96MU6 729 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 C11orf70Q9BRQ4 267 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 HAUS8Q9BT25 410 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 SLC2A11Q9BYW1 496 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 DBNDD1Q9H9R9 158 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 TBC1D23Q9NUY8 699 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 SERPINA10Q9UK55 444 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 TSC22D4Q9Y3Q8 395 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 K7ENM7 598 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 STAMBPO95630 424 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 ELK3P41970 407 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 NSFP46459 744 aaKnown RBP21.3■■□□□ 1
TMEFF1-201ENST00000374879 STX3Q13277 289 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 RSPH3Q86UC2 560 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 XAB2Q9HCS7 855 aaKnown RBP21.3■■□□□ 1
TMEFF1-201ENST00000374879 HSPBP1Q9NZL4 362 aa21.3■■□□□ 1
TMEFF1-201ENST00000374879 PI4KBQ9UBF8 816 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms