RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PDGFRBP09619 1106 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 AP2B1P63010 937 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 AP1B1Q10567 949 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 ALYREFQ86V81 257 aaKnown RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 SIX5Q8N196 739 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 CLPTM1LQ96KA5 538 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 SRPK1Q96SB4 655 aaKnown RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 APOBEC3GQ9HC16 384 aaKnown RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 SHOC2Q9UQ13 582 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 LCP1P13796 627 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 CLCN3P51790 818 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
NCDN-202ENST00000373243 CRADDP78560 199 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 CCDC14Q49A88 953 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 DPY19L2P1Q6NXN4 242 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 PPP1R2P3Q6NXS1 205 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 TEX13BQ9BXU2 312 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 TXLNGYQ9BZA5 131 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 SLC24A2Q9UI40 661 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 ITM2BQ9Y287 266 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 ADGRA3Q8IWK6 1321 aa12.54□□□□□ -0.4
NCDN-202ENST00000373243 ATP6V1B1P15313 513 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 TAF5Q15542 800 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 TRIP10Q15642 601 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 EML3Q32P44 896 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 Q3C1V9 767 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 HEATR6Q6AI08 1181 aaKnown RBP12.53□□□□□ -0.4
NCDN-202ENST00000373243 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ALLCQ8N6M5 410 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
NCDN-202ENST00000373243 CLIP3Q96DZ5 547 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 BTBD10Q9BSF8 475 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 TJP2Q9UDY2 1190 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 TELO2Q9Y4R8 837 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 IRS2Q9Y4H2 1338 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ATP9BO43861 1147 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.4
NCDN-202ENST00000373243 CXCL8P10145 99 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 TCN1P20061 433 aaPredicted RBP12.53□□□□□ -0.4
NCDN-202ENST00000373243 MIPP30301 263 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ARL4AP40617 200 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ABCG1P45844 678 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 NOVP48745 357 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 GDF10P55107 478 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ASPHQ12797 758 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 HIC1Q14526 733 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ACAP1Q15027 740 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 FNBP1LQ5T0N5 605 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ASRGL1Q7L266 308 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 CLNKQ7Z7G1 428 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 FAM136AQ96C01 138 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 DEFB129Q9H1M3 183 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 RGL2O15211 777 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ASMTLO95671 621 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 KCNA4P22459 653 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
NCDN-202ENST00000373243 TUFMP49411 452 aaKnown RBP12.53□□□□□ -0.4
NCDN-202ENST00000373243 NFIL3Q16649 462 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 IL31Q6EBC2 164 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 CD101Q93033 1021 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
NCDN-202ENST00000373243 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 MYPNQ86TC9 1320 aa12.53□□□□□ -0.4
NCDN-202ENST00000373243 WNT10BO00744 389 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 APOL1O14791 398 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.4
NCDN-202ENST00000373243 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.4
NCDN-202ENST00000373243 SLC34A1Q06495 639 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 RXFP2Q8WXD0 754 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 CRYGNQ8WXF5 182 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 MFSD14AQ96MC6 490 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.4
NCDN-202ENST00000373243 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.4
NCDN-202ENST00000373243 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 YDJCA8MPS7 323 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 CYB561D2O14569 222 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 AIM2O14862 343 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 SUPT20HL2P0C7V6 817 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 SUPT20HL1Q3ZLR7 823 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 MON1BQ7L1V2 547 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 KDELC2Q7Z4H8 507 aa12.52□□□□□ -0.41
NCDN-202ENST00000373243 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms