RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ZBTB24O43167 697 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 HYAL3O43820 417 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 TLR5O60602 858 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 CUTAO60888 179 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 AP1G2O75843 785 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 TRIM16O95361 564 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 HOXB2P14652 356 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 CASP4P49662 377 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 SIM1P81133 766 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 BIRC3Q13489 604 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 NCOA4Q13772 614 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 KNOP1Q1ED39 458 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 ZNF699Q32M78 642 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 GRAMD4Q6IC98 578 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 SDE2Q6IQ49 451 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 ZNF396Q96N95 335 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 XPO6Q96QU8 1125 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 SMOQ99835 787 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 GABRG3Q99928 467 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 NACA2Q9H009 215 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 CSNK1G1Q9HCP0 422 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 MARK1Q9P0L2 795 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 CALCOCO1Q9P1Z2 691 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 ATXN2Q99700 1313 aaKnown RBP13.84□□□□□ -0.19
TRAPPC3-201ENST00000373159 ANKRD11Q6UB99 2663 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 SPAARA0A1B0GVQ0 90 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 A0A1W2PQD8 194 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 CACNG3O60359 315 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 OPHN1O60890 802 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 BEST1O76090 585 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 VNN1O95497 513 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 YEATS4O95619 227 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 TBX18O95935 607 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 RPN1P04843 607 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 RDXP35241 583 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 WASP42768 502 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 PGFP49763 221 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 HNRNPDQ14103 355 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 SGSM1Q2NKQ1 1148 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 EGFLAMQ63HQ2 1017 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 KIAA1211LQ6NV74 962 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 ACOT1Q86TX2 421 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 CHPFQ8IZ52 775 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 DEFB119Q8N690 84 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 ZNF419Q96HQ0 510 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 ACOX2Q99424 681 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 GTPBP2Q9BX10 602 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 SDCBP2Q9H190 292 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 BLZF1Q9H2G9 400 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 SLC39A2Q9NP94 309 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 CYLDQ9NQC7 956 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 TLR8Q9NR97 1041 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 KRT82Q9NSB4 513 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 DNAJC17Q9NVM6 304 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 DMAC2Q9NW81 257 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 SPEGQ15772 3267 aa13.83□□□□□ -0.2
TRAPPC3-201ENST00000373159 DMXL2Q8TDJ6 3036 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 GFRA2O00451 464 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 POLR2DO15514 142 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 IRF1P10914 325 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 P4HA1P13674 534 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 TYRP14679 529 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 CASP1P29466 404 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 SLC14A1Q13336 389 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 UNC93AQ86WB7 457 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 ZCCHC14Q8WYQ9 949 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 TAF4BQ92750 862 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 FSCN3Q9NQT6 498 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 DNAAF2Q9NVR5 837 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 KLK13Q9UKR3 277 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 SCML2Q9UQR0 700 aa13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 DSPP15924 2871 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-201ENST00000373159 PRRT4C9JH25 899 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 SYPP08247 313 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 CD59P13987 128 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 CCDC130P13994 396 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 NDUFV2P19404 249 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 NDST1P52848 882 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 ZACNQ401N2 412 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 KLHDC10Q6PID8 442 aa13.81□□□□□ -0.2
TRAPPC3-201ENST00000373159 SCARA5Q6ZMJ2 495 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms