RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SLC15A5A6NIM6 579 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 CAPN14A8MX76 684 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 GYG2O15488 501 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 USP2O75604 605 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 KRT37O76014 449 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 MCF2P10911 925 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 NDST1P52848 882 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 ACSBG2Q5FVE4 666 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PCDH19Q8TAB3 1148 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 APBB2Q92870 758 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 HPDLQ96IR7 371 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 ASB7Q9H672 318 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PCDH18Q9HCL0 1135 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 KCNK4Q9NYG8 393 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PIK3R2O00459 728 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 NOP56O00567 594 aaKnown RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 FCHO1O14526 889 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 SKAP2O75563 359 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 OSBPP22059 807 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 SLC26A2P50443 739 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 SLC10A6Q3KNW5 377 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 TEX44Q53QW1 395 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 BOLA3Q53S33 107 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 ZNF534Q76KX8 674 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 MAP7D3Q8IWC1 876 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 MCUQ8NE86 351 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 FAM167BQ9BTA0 163 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 NMUR2Q9GZQ4 415 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PLXNA1Q9UIW2 1896 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 HMX2A2RU54 273 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 APOL1O14791 398 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 GRAP2O75791 330 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 GSTA2P09210 222 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 OCRLQ01968 901 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 ZBTB16Q05516 673 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 KRT81Q14533 505 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 CDO1Q16878 200 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 OR6B2Q6IFH4 312 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 CCDC62Q6P9F0 684 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 OLFML1Q6UWY5 402 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-202ENST00000372621 LRRC39Q96DD0 335 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 SPATA33Q96N06 139 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 MECRQ9BV79 373 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 PDZD7Q9H5P4 517 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 CITO14578 2027 aa13.24□□□□□ -0.29
CTPS1-202ENST00000372621 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 UGT1A9O60656 530 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CNMDO75829 334 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 C22orf31O95567 290 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 STAU1O95793 577 aaKnown RBP13.23□□□□□ -0.29
CTPS1-202ENST00000372621 APOEP02649 317 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 P4HA1P13674 534 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 VGLL4Q14135 290 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 KPNB1Q14974 876 aaKnown RBP13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CA9Q16790 459 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 PKDCCQ504Y2 493 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 FAXCQ5TGI0 409 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 UNC5AQ6ZN44 842 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 ALYREFQ86V81 257 aaKnown RBP13.23□□□□□ -0.29
CTPS1-202ENST00000372621 DNAJC9Q8WXX5 260 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 SPDL1Q96EA4 605 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 ZNF333Q96JL9 665 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 KLC2Q9H0B6 622 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 UGT1A7Q9HAW7 530 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 UGT1A10Q9HAW8 530 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 UGT1A8Q9HAW9 530 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 GPATCH2LQ9NWQ4 482 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 GGA3Q9NZ52 723 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 STOML1Q9UBI4 398 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 KIAA1257Q9ULG3 409 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 HBP1O60381 514 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CSH1P0DML2 217 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CSH2P0DML3 217 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 BCAR1P56945 870 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CDK18Q07002 472 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 BST1Q10588 318 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 TRIM68Q6AZZ1 485 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CAPRIN2Q6IMN6 1127 aaKnown RBP13.23□□□□□ -0.29
CTPS1-202ENST00000372621 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
CTPS1-202ENST00000372621 CTAGE3PQ8IX95 158 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 WDR60Q8WVS4 1066 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 MIS12Q9H081 205 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 SMARCAD1Q9H4L7 1026 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 LTBP3Q9NS15 1303 aa13.23□□□□□ -0.29
CTPS1-202ENST00000372621 FAM159BA6NKW6 160 aa13.22□□□□□ -0.29
CTPS1-202ENST00000372621 ZNF487B1APH4 448 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms