RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 PSEN1P49768 467 aa17.11■□□□□ 0.33
TMEM53-203ENST00000372242 SLC6A3Q01959 620 aa17.11■□□□□ 0.33
TMEM53-203ENST00000372242 BTBD8Q5XKL5 378 aa17.11■□□□□ 0.33
TMEM53-203ENST00000372242 ALKBH5Q6P6C2 394 aaKnown RBP17.11■□□□□ 0.33
TMEM53-203ENST00000372242 ARID3BQ8IVW6 561 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-203ENST00000372242 MCOLN2Q8IZK6 566 aa17.11■□□□□ 0.33
TMEM53-203ENST00000372242 TDRD5Q8NAT2 981 aaKnown RBP17.11■□□□□ 0.33
TMEM53-203ENST00000372242 ACSF2Q96CM8 615 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-203ENST00000372242 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
TMEM53-203ENST00000372242 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
TMEM53-203ENST00000372242 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 RTN2O75298 545 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 PRAMEF12O95522 483 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 FYNP06241 537 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 AVPR1AP37288 418 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 RNASE9P60153 205 aaKnown RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 YWHAZP63104 245 aaKnown RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 SLC18A3Q16572 532 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 C10orf120Q5SQS8 335 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 CCDC122Q5T0U0 273 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 FAM102AQ5T9C2 384 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 RSRC2Q7L4I2 434 aaKnown RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 TTC16Q8NEE8 873 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 GOLGA1Q92805 767 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 KHSRPQ92945 711 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ASB16Q96NS5 453 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ABCC13Q9NSE7 274 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 NAALADL1Q9UQQ1 740 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 GJB6O95452 261 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 CALB1P05937 261 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 RALAP11233 206 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 NCAM1P13591 858 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 RRM1P23921 792 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 VIPR2P41587 438 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 TUBP50607 506 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-203ENST00000372242 EFHC1Q5JVL4 640 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 SLC26A9Q7LBE3 791 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ZDHHC17Q8IUH5 632 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 NACA2Q9H009 215 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 CCL26Q9Y258 94 aa17.1■□□□□ 0.33
TMEM53-203ENST00000372242 ABCB4P21439 1286 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 FECHP22830 423 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 GSDMDP57764 484 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 ZXDBP98169 803 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 ZP2Q05996 745 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 PARM1Q6UWI2 310 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 MIB1Q86YT6 1006 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 TMEM139Q8IV31 216 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 ADHFE1Q8IWW8 467 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 FGF14Q92915 247 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 USP13Q92995 863 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-203ENST00000372242 BAG1Q99933 345 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-203ENST00000372242 POPDC2Q9HBU9 364 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 METTL5Q9NRN9 209 aaKnown RBP17.09■□□□□ 0.33
TMEM53-203ENST00000372242 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 LIMD1Q9UGP4 676 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 STRIP2Q9ULQ0 834 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 ZFP37Q9Y6Q3 630 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-203ENST00000372242 VCANP13611 3396 aa17.09■□□□□ 0.33
TMEM53-203ENST00000372242 ZNF263O14978 683 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 OLFM2O95897 454 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 MBL2P11226 248 aaPredicted RBP17.08■□□□□ 0.33
TMEM53-203ENST00000372242 ATP5C1P36542 298 aaKnown RBP17.08■□□□□ 0.33
TMEM53-203ENST00000372242 EFEMP1Q12805 493 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 MTF1Q14872 753 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 TMTC1Q8IUR5 882 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 RNF139Q8WU17 664 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 GKN1Q9NS71 199 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 TDP1Q9NUW8 608 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 SFMBT1Q9UHJ3 866 aa17.08■□□□□ 0.33
TMEM53-203ENST00000372242 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 LOC730098B7Z3J9 87 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 CAPN9O14815 690 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 HSF2BPO75031 334 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 FCARP24071 287 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 DCAF6Q58WW2 860 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 PPP1R2P3Q6NXS1 205 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 DEFB106AQ8N104 65 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 EMC1Q8N766 993 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 ADAM32Q8TC27 787 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 RSAD2Q8WXG1 361 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 ZNF653Q96CK0 615 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 RSPRY1Q96DX4 576 aa17.07■□□□□ 0.32
TMEM53-203ENST00000372242 VCPIP1Q96JH7 1222 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms