RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ERMARDQ5T6L9 678 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 KIAA1841Q6NSI8 718 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 BHLHA9Q7RTU4 235 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 C1orf54Q8WWF1 131 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 PGLYRP2Q96PD5 576 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 HINFPQ9BQA5 517 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 DCLK3Q9C098 648 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 RAB17Q9H0T7 212 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 CHST7Q9NS84 486 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 NAALADL1Q9UQQ1 740 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 BACE2Q9Y5Z0 518 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 SYPL2Q5VXT5 272 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 TTC27Q6P3X3 843 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 C16orf59Q7L2K0 433 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 BEND5Q7L4P6 421 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 BNIPLQ7Z465 357 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 VSIG1Q86XK7 387 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 SLC39A11Q8N1S5 342 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 PIK3R5Q8WYR1 880 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 BADQ92934 168 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 CALN1Q9BXU9 219 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 PLEKHA4Q9H4M7 779 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 MRPL42Q9Y6G3 142 aaKnown RBP27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 PATJQ8NI35 1801 aa27.43■■□□□ 1.98
ATPAF1-202ENST00000371937 ZBBXA8MT70 800 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 M0QYT0 321 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 NCAM1P13591 858 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 RDXP35241 583 aaKnown RBP27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 KRT81Q14533 505 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 PRSS55Q6UWB4 352 aaPredicted RBP27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 ATAD1Q8NBU5 361 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 FBXO22Q8NEZ5 403 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 SCAMP5Q8TAC9 235 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 RIN2Q8WYP3 895 aaPredicted RBP27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 SNRNP25Q9BV90 132 aaKnown RBP27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 ADAM33Q9BZ11 813 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 MTRRQ9UBK8 725 aa27.42■■□□□ 1.98
ATPAF1-202ENST00000371937 SOD2P04179 222 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 ARSEP51690 589 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 PSMD5Q16401 504 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 BSPRYQ5W0U4 402 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 SLC8B1Q6J4K2 584 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 RSPO2Q6UXX9 243 aaPredicted RBP27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 ZNF365Q70YC5 407 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 NUP93Q8N1F7 819 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 COLGALT1Q8NBJ5 622 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 SLCO2A1Q92959 643 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 VN1R3Q9BXE9 311 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 MAK16Q9BXY0 300 aaKnown RBP27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 SPG21Q9NZD8 308 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 CDY1Q9Y6F8 540 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 MTMR11A4FU01 709 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 CD48P09326 243 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 PTGIRP43119 386 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 ADCY2Q08462 1091 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 BBS12Q6ZW61 710 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 JAMLQ86YT9 394 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 PSTKQ8IV42 348 aaKnown RBP27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 EIF1ADQ8N9N8 165 aaKnown RBP27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 GRK7Q8WTQ7 553 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 PGAP3Q96FM1 320 aaPredicted RBP27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 FBXO44Q9H4M3 255 aa27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 R3HDM2Q9Y2K5 976 aaKnown RBP27.41■■□□□ 1.98
ATPAF1-202ENST00000371937 ZSCAN5CA6NGD5 496 aaPredicted RBP27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 F9P00740 461 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 DEUP1Q05D60 604 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 CUL1Q13616 776 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 DPYSL3Q14195 570 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 DDR2Q16832 855 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 TTC13Q8NBP0 860 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 SLC7A14Q8TBB6 771 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 ATG4AQ8WYN0 398 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 AAASQ9NRG9 546 aa27.4■■□□□ 1.98
ATPAF1-202ENST00000371937 ZNF487B1APH4 448 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 BHMG1C9JSJ3 638 aaPredicted RBP27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 ECEL1O95672 775 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 ATXN1P54253 815 aaKnown RBP27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 SNX1Q13596 522 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 BEND6Q5SZJ8 279 aaPredicted RBP27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 OTUD1Q5VV17 481 aaPredicted RBP27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 RNF19BQ6ZMZ0 732 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 MTERF4Q7Z6M4 381 aaKnown RBP27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 ATL2Q8NHH9 583 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 FAM71BQ8TC56 605 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 SEC14L1Q92503 715 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 SLC9A7Q96T83 725 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 ERP44Q9BS26 406 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 FRMD8P1Q9BZ68 369 aaPredicted RBP27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 CALCOCO1Q9P1Z2 691 aa27.39■■□□□ 1.98
ATPAF1-202ENST00000371937 ESYT3A0FGR9 886 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 CST8O60676 142 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 PPM1AP35813 382 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 TFDP2Q14188 446 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 DPYSL2Q16555 572 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 ZC3H12AQ5D1E8 599 aaKnown RBP27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 PSRC1Q6PGN9 363 aaPredicted RBP27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 DRICH1Q6PGQ1 229 aaPredicted RBP27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 SYDE1Q6ZW31 735 aaPredicted RBP27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 RFX6Q8HWS3 928 aa27.39■■□□□ 1.97
ATPAF1-202ENST00000371937 CASKIN2Q8WXE0 1202 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms