RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RALGAPA2Q2PPJ7 1873 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 BCLAF3A2AJT9 711 aaKnown RBP30.1■■■□□ 2.41
SSBP3-204ENST00000371320 MBLAC1A4D2B0 266 aaPredicted RBP30.1■■■□□ 2.41
SSBP3-204ENST00000371320 CFAP73A6NFT4 308 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 CD4P01730 458 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 TFE3P19532 575 aaPredicted RBP30.1■■■□□ 2.41
SSBP3-204ENST00000371320 GNL1P36915 607 aaPredicted RBP30.1■■■□□ 2.41
SSBP3-204ENST00000371320 PTPN9P43378 593 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 BNIP1Q12981 228 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 PRAMEF19Q5SWL8 479 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 FAM182AQ5T1J6 154 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 CLEC4CQ8WTT0 213 aa30.1■■■□□ 2.41
SSBP3-204ENST00000371320 PIN4Q9Y237 131 aaKnown RBP30.1■■■□□ 2.41
SSBP3-204ENST00000371320 SLC15A5A6NIM6 579 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 KBTBD13C9JR72 458 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 PIRO00625 290 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 MAP3K6O95382 1288 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 BCAT1P54687 386 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 YWHAGP61981 247 aaKnown RBP eCLIP30.09■■■□□ 2.41
SSBP3-204ENST00000371320 KBTBD7Q8WVZ9 684 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 SLC5A4Q9NY91 659 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 KLK14Q9P0G3 267 aa30.09■■■□□ 2.41
SSBP3-204ENST00000371320 TCRBV9S1A1TA0A576 114 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 AVILO75366 819 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 FGFR1P11362 822 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 AXLP30530 894 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 MGAT5Q09328 741 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SEPT7Q16181 437 aaKnown RBP30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SLC26A9Q7LBE3 791 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 ECHDC2Q86YB7 292 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 CRYBG2Q8N1P7 616 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 DNAJB3Q8WWF6 145 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 FRMD8Q9BZ67 464 aaPredicted RBP30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SNX25Q9H3E2 840 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 NRDE2Q9H7Z3 1164 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SLCO1B3Q9NPD5 702 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 IKBKGQ9Y6K9 419 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SMIM28A0A1B0GU29 152 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 KPNA7A9QM74 516 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 ZNF487B1APH4 448 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SPAG6O75602 509 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 LCP1P13796 627 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 CYP2F1P24903 491 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 NCALDP61601 193 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 ELF3P78545 371 aaPredicted RBP30.08■■■□□ 2.41
SSBP3-204ENST00000371320 SNCBQ16143 134 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 ALKBH8Q96BT7 664 aaKnown RBP30.08■■■□□ 2.41
SSBP3-204ENST00000371320 KLC2Q9H0B6 622 aa30.08■■■□□ 2.41
SSBP3-204ENST00000371320 LMO2P25791 158 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 ZNF200P98182 395 aaPredicted RBP30.07■■■□□ 2.4
SSBP3-204ENST00000371320 TBC1D1Q86TI0 1168 aaPredicted RBP30.07■■■□□ 2.4
SSBP3-204ENST00000371320 ZNF560Q96MR9 790 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 DHX35Q9H5Z1 703 aaKnown RBP30.07■■■□□ 2.4
SSBP3-204ENST00000371320 SPTLC1O15269 473 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 EDF1O60869 148 aaKnown RBP30.07■■■□□ 2.4
SSBP3-204ENST00000371320 L1CAMP32004 1257 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 MFSD10Q14728 455 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 CENPIQ92674 756 aaPredicted RBP30.07■■■□□ 2.4
SSBP3-204ENST00000371320 PTPN18Q99952 460 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 C11orf84Q9BUA3 381 aaPredicted RBP30.07■■■□□ 2.4
SSBP3-204ENST00000371320 ETNK2Q9NVF9 386 aa30.07■■■□□ 2.4
SSBP3-204ENST00000371320 IQANK1A0A1B0GTG1 560 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 MT-ND3P03897 115 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 DPYSL2Q16555 572 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 KBTBD12Q3ZCT8 623 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 FAXCQ5TGI0 409 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 CDKL3Q8IVW4 592 aaPredicted RBP30.06■■■□□ 2.4
SSBP3-204ENST00000371320 BANPQ8N9N5 519 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 TMEM40Q8WWA1 233 aa30.06■■■□□ 2.4
SSBP3-204ENST00000371320 GNEQ9Y223 722 aaKnown RBP30.06■■■□□ 2.4
SSBP3-204ENST00000371320 GOLGA8RI6L899 631 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 MGRN1O60291 552 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 ECM2O94769 699 aaPredicted RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 SCNN1AP37088 669 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 PNPLA4P41247 253 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 ATXN1P54253 815 aaKnown RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 YWHAZP63104 245 aaKnown RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 CBLBQ13191 982 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 PTK7Q13308 1070 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 HIC1Q14526 733 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 SNX17Q15036 470 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 ARCQ7LC44 396 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 SLC44A1Q8WWI5 657 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 ZNF75CPQ92670 426 aaPredicted RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 THOC1Q96FV9 657 aaKnown RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 KLF6Q99612 283 aaPredicted RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 DNAI2Q9GZS0 605 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 GDAP2Q9NXN4 497 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 HGSO14964 777 aaPredicted RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 TM9SF1O15321 606 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 XPOTO43592 962 aaKnown RBP30.05■■■□□ 2.4
SSBP3-204ENST00000371320 INHBAP08476 426 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 CCDC15Q0P6D6 951 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 ZNF618Q5T7W0 954 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 APPL2Q8NEU8 664 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 TCP10LQ8TDR4 215 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 LRRN4Q8WUT4 740 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 CFAP36Q96G28 342 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 RNF39Q9H2S5 420 aa30.05■■■□□ 2.4
SSBP3-204ENST00000371320 CYLDQ9NQC7 956 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms