RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ACBD5Q5T8D3 534 aaPredicted RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 OVOS1Q6IE37 1185 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 TLK2Q86UE8 772 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 HORMAD1Q86X24 394 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 MTMR9Q96QG7 549 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 DCLK3Q9C098 648 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 CDV3Q9UKY7 258 aaKnown RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 NCF1BA6NI72 391 aaPredicted RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 NCF1CA8MVU1 366 aaPredicted RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 PIK3CDO00329 1044 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 OCM2P0CE71 109 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 OCMP0CE72 109 aaPredicted RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 NCF1P14598 390 aaPredicted RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 MAP1SQ66K74 1059 aaPredicted RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 ZNF410Q86VK4 478 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 ZDHHC17Q8IUH5 632 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 PCDH9Q9HC56 1237 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 NT5MQ9NPB1 228 aa20.28■□□□□ 0.84
LMO4-202ENST00000370544 EIF3LQ9Y262 564 aaKnown RBP20.28■□□□□ 0.84
LMO4-202ENST00000370544 CRTAMO95727 393 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 GLRBP48167 497 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 KPNA1P52294 538 aaPredicted RBP20.27■□□□□ 0.84
LMO4-202ENST00000370544 DDI1Q8WTU0 396 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 HEY2Q9UBP5 337 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 GAKO14976 1311 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 LACTBL1A8MY62 500 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 ALDH2P05091 517 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 RHOAP61586 193 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 BTKQ06187 659 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 PPATQ06203 517 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 ELAVL2Q12926 359 aaKnown RBP20.27■□□□□ 0.84
LMO4-202ENST00000370544 STX5Q13190 355 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 TUBGCP3Q96CW5 907 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 ABHD16BQ9H3Z7 469 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 KANSL3Q9P2N6 904 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 GLI1P08151 1106 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 NUMBP49757 651 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 ATN1P54259 1190 aaPredicted RBP20.27■□□□□ 0.84
LMO4-202ENST00000370544 ADIGQ0VDE8 80 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 NFIL3Q16649 462 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 NBPF20Q3BBV1 942 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 NLRP9Q7RTR0 991 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 TLR8Q9NR97 1041 aaKnown RBP20.27■□□□□ 0.84
LMO4-202ENST00000370544 DMGDHQ9UI17 866 aaKnown RBP20.27■□□□□ 0.84
LMO4-202ENST00000370544 SLC24A2Q9UI40 661 aa20.27■□□□□ 0.84
LMO4-202ENST00000370544 H2AFXP16104 143 aaPredicted RBP20.27■□□□□ 0.83
LMO4-202ENST00000370544 ACAT1P24752 427 aaKnown RBP20.27■□□□□ 0.83
LMO4-202ENST00000370544 AXLP30530 894 aa20.27■□□□□ 0.83
LMO4-202ENST00000370544 ITIH4Q14624 930 aa20.27■□□□□ 0.83
LMO4-202ENST00000370544 GLIS2Q9BZE0 524 aaPredicted RBP20.27■□□□□ 0.83
LMO4-202ENST00000370544 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.83
LMO4-202ENST00000370544 FAM198AQ9UFP1 575 aa20.27■□□□□ 0.83
LMO4-202ENST00000370544 USP20Q9Y2K6 914 aa20.27■□□□□ 0.83
LMO4-202ENST00000370544 MANSC4A6NHS7 340 aaPredicted RBP20.26■□□□□ 0.83
LMO4-202ENST00000370544 ENDOD1O94919 500 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 VEGFAP15692 232 aaPredicted RBP20.26■□□□□ 0.83
LMO4-202ENST00000370544 CACHD1Q5VU97 1274 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 VCPIP1Q96JH7 1222 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 SKOR1P84550 965 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 ARMC6Q6NXE6 501 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 KCNK18Q7Z418 384 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 EDEM1Q92611 657 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 CAVIN3Q969G5 261 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 TBCBQ99426 244 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 EMILIN2Q9BXX0 1053 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 TBC1D13Q9NVG8 400 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 CCR1P32246 355 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 MYO1HQ8N1T3 1032 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 KAT2BQ92831 832 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 ZNF333Q96JL9 665 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 SPASTQ9UBP0 616 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 ITGALP20701 1170 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 UCMAQ8WVF2 138 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 DNAJC9Q8WXX5 260 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 SLC40A1Q9NP59 571 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 BLOC1S6Q9UL45 172 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 V9GYQ6 96 aa20.26■□□□□ 0.83
LMO4-202ENST00000370544 AKR1A1P14550 325 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 STX19Q8N4C7 294 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 CDK5RAP1Q96SZ6 601 aaKnown RBP20.25■□□□□ 0.83
LMO4-202ENST00000370544 VANGL2Q9ULK5 521 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 L1RE1Q9UN81 338 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 PCDHB5Q9Y5E4 795 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 HNRNPRO43390 633 aaKnown RBP20.25■□□□□ 0.83
LMO4-202ENST00000370544 TRIM16O95361 564 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 PAEPP09466 180 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 HPCAP84074 193 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 SUGP1Q8IWZ8 645 aaKnown RBP20.25■□□□□ 0.83
LMO4-202ENST00000370544 MYCBPAPQ8TBZ2 947 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 TAF2Q6P1X5 1199 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 C15orf52Q6ZUT6 534 aaKnown RBP20.25■□□□□ 0.83
LMO4-202ENST00000370544 ECSITQ9BQ95 431 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 CLPBQ9H078 707 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 ANKRD63C9JTQ0 380 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 CBX4O00257 560 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 LZTS3O60299 673 aaPredicted RBP20.25■□□□□ 0.83
LMO4-202ENST00000370544 SERPINB5P36952 375 aa20.25■□□□□ 0.83
LMO4-202ENST00000370544 C11orf96Q7Z7L8 435 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms