RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 TEX44Q53QW1 395 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 RARS2Q5T160 578 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 DUS1LQ6P1R4 473 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 PPP4R1Q8TF05 950 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 GAB3Q8WWW8 586 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 MRPS26Q9BYN8 205 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 SORCS3Q9UPU3 1222 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 MRPL11Q9Y3B7 192 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 ITM2AO43736 263 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 FAM163BP0C2L3 166 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 KCNA4P22459 653 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 UGCGQ16739 394 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 HADHQ16836 314 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 SH3D19Q5HYK7 790 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 ANGEL2Q5VTE6 544 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 TDRD10Q5VZ19 366 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 SLC39A4Q6P5W5 647 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 PQLC1Q8N2U9 271 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 THEGQ9P2T0 379 aa14.91□□□□□ -0.02
PHTF1-204ENST00000369604 PAIP2BQ9ULR5 123 aaKnown RBP14.91□□□□□ -0.02
PHTF1-204ENST00000369604 MYH9P35579 1960 aaKnown RBP14.9□□□□□ -0.02
PHTF1-204ENST00000369604 DNAJA2O60884 412 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 SPAG6O75602 509 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 CRTAMO95727 393 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 TSHRP16473 764 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 VWA5B1Q5TIE3 1220 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 FBXW8Q8N3Y1 598 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 TRIML2Q8N7C3 387 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 ACTRT2Q8TDY3 377 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 ST6GALNAC4Q9H4F1 302 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 TEX264Q9Y6I9 313 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 CNTNAP4Q9C0A0 1308 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 WNK3Q9BYP7 1800 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 PIM1P11309 404 aaPredicted RBP14.9□□□□□ -0.02
PHTF1-204ENST00000369604 MSX2P35548 267 aaPredicted RBP14.9□□□□□ -0.02
PHTF1-204ENST00000369604 LIG4P49917 911 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 C6orf52Q5T4I8 152 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 PDPK2PQ6A1A2 396 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 MARVELD2Q8N4S9 558 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 APOBEC3GQ9HC16 384 aaKnown RBP14.9□□□□□ -0.02
PHTF1-204ENST00000369604 DCXO43602 365 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 RFPL1O75677 317 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 FAM58BPP0C7Q3 252 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 ACO1P21399 889 aaKnown RBP14.9□□□□□ -0.02
PHTF1-204ENST00000369604 ROR1Q01973 937 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 SNAPC2Q13487 334 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 TMEM174Q8WUU8 243 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 KCNK16Q96T55 309 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 PNPOQ9NVS9 261 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 ITGA11Q9UKX5 1188 aa14.9□□□□□ -0.02
PHTF1-204ENST00000369604 AIM2O14862 343 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 SF3B1O75533 1304 aaKnown RBP eCLIP14.89□□□□□ -0.036e-6■■■■■ 62.3
PHTF1-204ENST00000369604 ITGAXP20702 1163 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 CRKP46108 304 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 SLC1A6P48664 564 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 MRPS22P82650 360 aaKnown RBP14.89□□□□□ -0.03
PHTF1-204ENST00000369604 WDR78Q5VTH9 848 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 NPNTQ6UXI9 565 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 BBS12Q6ZW61 710 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 AMIGO2Q86SJ2 522 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 TMEM35BQ8NCS4 154 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 COPS7BQ9H9Q2 264 aaPredicted RBP14.89□□□□□ -0.03
PHTF1-204ENST00000369604 LIN28AQ9H9Z2 209 aaKnown RBP14.89□□□□□ -0.03
PHTF1-204ENST00000369604 TELO2Q9Y4R8 837 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 CFLARO15519 480 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 ATP5BP06576 529 aaKnown RBP14.89□□□□□ -0.03
PHTF1-204ENST00000369604 APRTP07741 180 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 KRT7P08729 469 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 SLC5A2P31639 672 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 SMAD1Q15797 465 aaKnown RBP14.89□□□□□ -0.03
PHTF1-204ENST00000369604 ZACNQ401N2 412 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 B3GNT9Q6UX72 402 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 FRMD7Q6ZUT3 714 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 BSNDQ8WZ55 320 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 NRDE2Q9H7Z3 1164 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 ARHGAP26Q9UNA1 814 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 SH3GLB1Q9Y371 365 aa14.89□□□□□ -0.03
PHTF1-204ENST00000369604 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
PHTF1-204ENST00000369604 XPO1O14980 1071 aaKnown RBP14.88□□□□□ -0.03
PHTF1-204ENST00000369604 AP1G1O43747 822 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 PEX1O43933 1283 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 SNNO75324 88 aaPredicted RBP14.88□□□□□ -0.03
PHTF1-204ENST00000369604 KDELR1P24390 212 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 RFC1P35251 1148 aaPredicted RBP14.88□□□□□ -0.03
PHTF1-204ENST00000369604 OGFRL1Q5TC84 451 aaPredicted RBP14.88□□□□□ -0.03
PHTF1-204ENST00000369604 PGM2L1Q6PCE3 622 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 KLHL35Q6PF15 583 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 GSDMBQ8TAX9 411 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 DDI1Q8WTU0 396 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 C17orf75Q9HAS0 396 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 HERC5Q9UII4 1024 aaKnown RBP14.88□□□□□ -0.03
PHTF1-204ENST00000369604 PSMD13Q9UNM6 376 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 TTLL3Q9Y4R7 772 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 HEMK1Q9Y5R4 338 aaPredicted RBP14.88□□□□□ -0.03
PHTF1-204ENST00000369604 AK5Q9Y6K8 562 aa14.88□□□□□ -0.03
PHTF1-204ENST00000369604 WDR64B1ANS9 1081 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms