RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CTSHP09668 335 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 HMGA1P17096 107 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 ATP1A2P50993 1020 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PPP2R2AP63151 447 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CYP4A11Q02928 519 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 TMEM259Q4ZIN3 620 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 TIGD5Q53EQ6 642 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 TJAP1Q5JTD0 557 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RNF220Q5VTB9 566 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 KLC3Q6P597 504 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 SV2BQ7L1I2 683 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 TRPM8Q7Z2W7 1104 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RHPN2Q8IUC4 686 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CCDC65Q8IXS2 484 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GSPT2Q8IYD1 628 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 POF1BQ8WVV4 589 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 NELFBQ8WX92 580 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 DDX12PQ92771 950 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CHMP6Q96FZ7 201 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 C11orf84Q9BUA3 381 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 FAM114A2Q9NRY5 505 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RNF14Q9UBS8 474 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PLXNB3Q9ULL4 1909 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PROB1E7EW31 1015 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PEX11AO75192 247 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PAPSS2O95340 614 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GYPCP04921 128 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CD44P16070 742 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CDC25CP30307 473 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 MSH2P43246 934 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 MTIF2P46199 727 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PAK1Q13153 545 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 MORC3Q14149 939 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 DUS1LQ6P1R4 473 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GET4Q7L5D6 327 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RNF149Q8NC42 400 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GLG1Q92896 1179 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GFM2Q969S9 779 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 FAM131CQ96AQ9 280 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CCDC43Q96MW1 224 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GSDMAQ96QA5 445 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 TTLL2Q9BWV7 592 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 MRPL9Q9BYD2 267 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CARD9Q9H257 536 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RABEP2Q9H5N1 569 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 NUMBLQ9Y6R0 609 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 MAGEA13PA6NCF6 341 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 HOXA2O43364 376 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 NOL4O94818 638 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 KRT14P02533 472 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 ITGA2BP08514 1039 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CNPP09543 421 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 PABPC4LP0CB38 370 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RPL9P32969 192 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 CTAG1AP78358 180 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 TUSC3Q13454 348 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 MEA1Q16626 185 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 WASHC2DQ5SRD0 308 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 BRSK2Q8IWQ3 736 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 SCML4Q8N228 414 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 STK32AQ8WU08 396 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 IRF2BPLQ9H1B7 796 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 KCNH6Q9H252 994 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 RSAD1Q9HA92 442 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 ABHD10Q9NUJ1 306 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 DMGDHQ9UI17 866 aaKnown RBP7.2□□□□□ -1.26
CSDE1-204ENST00000369530 SNX12Q9UMY4 172 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 USTQ9Y2C2 406 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 SPO11Q9Y5K1 396 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 FREM2Q5SZK8 3169 aa7.2□□□□□ -1.26
CSDE1-204ENST00000369530 GJB6O95452 261 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 SEC24AO95486 1093 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 GNA14O95837 355 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 IL9P15248 144 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 GBP1P32455 592 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 MLH1P40692 756 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 CCR2P41597 374 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 PMS1P54277 932 aaKnown RBP7.19□□□□□ -1.26
CSDE1-204ENST00000369530 CACNB1Q02641 598 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-204ENST00000369530 ITGA9Q13797 1035 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 TCEAL8Q8IYN2 117 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 C1orf127Q8N9H9 656 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 HPS3Q969F9 1004 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 LRRC3BQ96PB8 259 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 POLD4Q9HCU8 107 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 HCN2Q9UL51 889 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 MMEP08473 750 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 TYMPP19971 482 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 EMP3P54852 163 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 KPNB1Q14974 876 aaKnown RBP7.19□□□□□ -1.26
CSDE1-204ENST00000369530 PSMD6Q15008 389 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 RAB41Q5JT25 222 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 CFAP157Q5JU67 520 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 TPH2Q8IWU9 490 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 WDR60Q8WVS4 1066 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 RSPRY1Q96DX4 576 aa7.19□□□□□ -1.26
CSDE1-204ENST00000369530 DNAJC7Q99615 494 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms