RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 NPY6RQ99463 290 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 TRIM31Q9BZY9 425 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 RAB17Q9H0T7 212 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 DPH5Q9H2P9 285 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 RASAL2Q9UJF2 1139 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 NFU1Q9UMS0 254 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 UTP11Q9Y3A2 253 aaKnown RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 PCDHB5Q9Y5E4 795 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 SYNJ2BP-COX16A0A087WUM0 186 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 MDM4O15151 490 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 KRT81Q14533 505 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 CA9Q16790 459 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 BOLA3Q53S33 107 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 PRSS55Q6UWB4 352 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-202ENST00000369409 RSPO2Q6UXX9 243 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-202ENST00000369409 ANKS3Q6ZW76 656 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 OTOP2Q7RTS6 562 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 UBE2Q1Q7Z7E8 422 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 DDX42Q86XP3 938 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■□□ 16.1
PHGDH-202ENST00000369409 RFX6Q8HWS3 928 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 AENQ8WTP8 325 aaKnown RBP17.53■□□□□ 0.4
PHGDH-202ENST00000369409 IL23AQ9NPF7 189 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 COX16Q9P0S2 106 aa17.53■□□□□ 0.4
PHGDH-202ENST00000369409 H7C4K7 107 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 M0QYT0 321 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 DAPK3O43293 454 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 ECEL1O95672 775 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 GPR15P49685 360 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 ARSEP51690 589 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 MMRN1Q13201 1228 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 DPYSL3Q14195 570 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 CCNG2Q16589 344 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 PM20D1Q6GTS8 502 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 KCNT2Q6UVM3 1135 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 FAM131BQ86XD5 332 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 CCDC185Q8N715 623 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 IRGQQ8WZA9 623 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 NT5C3BQ969T7 300 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 IGSF21Q96ID5 467 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 CCDC114Q96M63 670 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 GDAP1L1Q96MZ0 367 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 VN1R3Q9BXE9 311 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 HOMER3Q9NSC5 361 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 EFR3BQ9Y2G0 817 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 USP3Q9Y6I4 520 aa17.52■□□□□ 0.4
PHGDH-202ENST00000369409 TNFRSF10BO14763 440 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 CST8O60676 142 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 BAIAP3O94812 1187 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 NCAM1P13591 858 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 TNNT3P45378 269 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-202ENST00000369409 EPHB4P54760 987 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 NME3Q13232 169 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 BTG3Q14201 252 aaPredicted RBP17.52■□□□□ 0.39
PHGDH-202ENST00000369409 HLTFQ14527 1009 aaKnown RBP eCLIP17.52■□□□□ 0.39
PHGDH-202ENST00000369409 ERMARDQ5T6L9 678 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 SDHAF4Q5VUM1 108 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 VSTM1Q6UX27 236 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 BBS12Q6ZW61 710 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 SCML4Q8N228 414 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 ATAD1Q8NBU5 361 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 SLC7A14Q8TBB6 771 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 EDEM1Q92611 657 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 ERP44Q9BS26 406 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 AP4E1Q9UPM8 1137 aa17.52■□□□□ 0.39
PHGDH-202ENST00000369409 MTMR11A4FU01 709 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 TRIM66O15016 1216 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 TBC1D4O60343 1298 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 ENDOD1O94919 500 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 EFEMP2O95967 443 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 RDXP35241 583 aaKnown RBP17.51■□□□□ 0.39
PHGDH-202ENST00000369409 KRT17Q04695 432 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 CUL1Q13616 776 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 PDK2Q15119 407 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 DDR2Q16832 855 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 USP41Q3LFD5 358 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 BNIPLQ7Z465 357 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 MTERF4Q7Z6M4 381 aaKnown RBP17.51■□□□□ 0.39
PHGDH-202ENST00000369409 CMTR2Q8IYT2 770 aaKnown RBP17.51■□□□□ 0.39
PHGDH-202ENST00000369409 ADAM32Q8TC27 787 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 SEC14L1Q92503 715 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 SLCO2A1Q92959 643 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 ZNF558Q96NG5 402 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 DHX35Q9H5Z1 703 aaKnown RBP17.51■□□□□ 0.39
PHGDH-202ENST00000369409 PCDH18Q9HCL0 1135 aa17.51■□□□□ 0.39
PHGDH-202ENST00000369409 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
PHGDH-202ENST00000369409 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 LIASO43766 372 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 MAGEA11P43364 429 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 DEUP1Q05D60 604 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 GPR17Q13304 367 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 PSMD5Q16401 504 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 PPP6R3Q5H9R7 873 aaPredicted RBP17.5■□□□□ 0.39
PHGDH-202ENST00000369409 DUPD1Q68J44 220 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 MAP7D3Q8IWC1 876 aa17.5■□□□□ 0.39
PHGDH-202ENST00000369409 RNF168Q8IYW5 571 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms