RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 AFF4Q9UHB7 1163 aaKnown RBP24.94■■□□□ 1.58
SNX3-203ENST00000368979 TCRBV7S2A1N4TA0A589 114 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 LRRD1A4D1F6 860 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 LCHNA4D1U4 455 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 CAPN9O14815 690 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 ABLIM3O94929 683 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 RALAP11233 206 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 PITX1P78337 314 aaPredicted RBP24.93■■□□□ 1.58
SNX3-203ENST00000368979 KRT17Q04695 432 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 DUSP4Q13115 394 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 BSPRYQ5W0U4 402 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 SPOCD1Q6ZMY3 1216 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 ADAT2Q7Z6V5 191 aaKnown RBP24.93■■□□□ 1.58
SNX3-203ENST00000368979 TRIM62Q9BVG3 475 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 OSBPL8Q9BZF1 889 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 EPC1Q9H2F5 836 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 ANKZF1Q9H8Y5 726 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 RRN3Q9NYV6 651 aa24.93■■□□□ 1.58
SNX3-203ENST00000368979 GOLGA6L10A0A0M3HER8 536 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 SOAT2O75908 522 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 NCAM1P13591 858 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 CETN2P41208 172 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 ATXN1P54253 815 aaKnown RBP24.92■■□□□ 1.58
SNX3-203ENST00000368979 RPL10AP62906 217 aaKnown RBP24.92■■□□□ 1.58
SNX3-203ENST00000368979 IFRD2Q12894 506 aaPredicted RBP24.92■■□□□ 1.58
SNX3-203ENST00000368979 KLF1Q13351 362 aaPredicted RBP24.92■■□□□ 1.58
SNX3-203ENST00000368979 PPP2R5EQ16537 467 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 BOLA3Q53S33 107 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 TPGS2Q68CL5 300 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 SCYL2Q6P3W7 929 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 STKLD1Q8NE28 680 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 FBXO44Q9H4M3 255 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 HSFX1Q9UBD0 423 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 SCML2Q9UQR0 700 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 PLXNA4Q9HCM2 1894 aa24.92■■□□□ 1.58
SNX3-203ENST00000368979 FAM92AA1XBS5 289 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 MDM4O15151 490 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 LILRB3O75022 631 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 RHOXF2BP0C7M4 288 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 KDELR1P24390 212 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 RDXP35241 583 aaKnown RBP24.91■■□□□ 1.58
SNX3-203ENST00000368979 CDKN2BP42772 138 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 ARSEP51690 589 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 YWHAGP61981 247 aaKnown RBP eCLIP24.91■■□□□ 1.58
SNX3-203ENST00000368979 RAB33AQ14088 237 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 LLGL1Q15334 1064 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 TAZQ16635 292 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 ODF2Q5BJF6 829 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 SCD5Q86SK9 330 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 PRELID2Q8N945 189 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 KLHL23Q8NBE8 558 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 ZNF461Q8TAF7 563 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 MAIP1Q8WWC4 291 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 HSPH1Q92598 858 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 PGAP3Q96FM1 320 aaPredicted RBP24.91■■□□□ 1.58
SNX3-203ENST00000368979 CEP295NLQ96MC4 621 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 KRT12Q99456 494 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 RHOXF2Q9BQY4 288 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 SNRNP25Q9BV90 132 aaKnown RBP24.91■■□□□ 1.58
SNX3-203ENST00000368979 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.91■■□□□ 1.58
SNX3-203ENST00000368979 MRPL17Q9NRX2 175 aaKnown RBP24.91■■□□□ 1.58
SNX3-203ENST00000368979 FNIP2Q9P278 1114 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 hCG_1818297A0A087WSY0 165 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 M0QYT0 321 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 CTSAP10619 480 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 USP46P62068 366 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 CYP1B1Q16678 543 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 TFDP3Q5H9I0 405 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 DENND5BQ6ZUT9 1274 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 KLHL7Q8IXQ5 586 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 AUTS2Q8WXX7 1259 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 EDEM1Q92611 657 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 LRRC1Q9BTT6 524 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 DDX47Q9H0S4 455 aaKnown RBP24.91■■□□□ 1.58
SNX3-203ENST00000368979 RXFP1Q9HBX9 757 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 COMMD8Q9NX08 183 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 MTUS1Q9ULD2 1270 aa24.91■■□□□ 1.58
SNX3-203ENST00000368979 RTN3O95197 1032 aaPredicted RBP24.9■■□□□ 1.58
SNX3-203ENST00000368979 ATF2P15336 505 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 ATF6P18850 670 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 DNAJB2P25686 324 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 TUFMP49411 452 aaKnown RBP24.9■■□□□ 1.58
SNX3-203ENST00000368979 CREMQ03060 361 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 GLE1Q53GS7 698 aaKnown RBP24.9■■□□□ 1.58
SNX3-203ENST00000368979 C8orf74Q6P047 294 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 SLC7A14Q8TBB6 771 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 HEMGNQ9BXL5 484 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 ABCC13Q9NSE7 274 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.9■■□□□ 1.58
SNX3-203ENST00000368979 GREB1Q4ZG55 1949 aa24.9■■□□□ 1.58
SNX3-203ENST00000368979 PHF2O75151 1096 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 BMPR1AP36894 532 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 DEUP1Q05D60 604 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 ERMARDQ5T6L9 678 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 C12orf50Q8NA57 414 aaPredicted RBP24.89■■□□□ 1.57
SNX3-203ENST00000368979 KCTD6Q8NC69 237 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 FAM71BQ8TC56 605 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 GPR152Q8TDT2 470 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 SLITRK6Q9H5Y7 841 aa24.89■■□□□ 1.57
SNX3-203ENST00000368979 PIGVQ9NUD9 493 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms