RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PIRO00625 290 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 C2CD2LO14523 706 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 XPO1O14980 1071 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 KCNN4O15554 427 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 KPNA6O60684 536 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 UBOX5O94941 541 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 SNRPAP09012 282 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 ZNF286BP0CG31 522 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 CREB1P16220 341 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 WARSP23381 471 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 PRKCHP24723 683 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 HOXA11P31270 313 aaPredicted RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 ARL4AP40617 200 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 TAF6P49848 677 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 CPT1AP50416 773 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 GTF2A1P52655 376 aaPredicted RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 GDF10P55107 478 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 NCALDP61601 193 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 FASTKD3Q14CZ7 662 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 FNBP1LQ5T0N5 605 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 STXBP5Q5T5C0 1151 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 PPP1R26Q5T8A7 1209 aaPredicted RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 LVRNQ6Q4G3 990 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 GPR142Q7Z601 462 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 LRRC6Q86X45 466 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 ANKMY2Q8IV38 441 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 APPL2Q8NEU8 664 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 DCAKDQ8WVC6 231 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 ZNF75CPQ92670 426 aaPredicted RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 APOPT1Q96IL0 206 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 QKIQ96PU8 341 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPM3-209ENST00000368527 PEBP4Q96S96 227 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 SLC9A7Q96T83 725 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 PAIP2Q9BPZ3 127 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 C11orf84Q9BUA3 381 aaPredicted RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 SNRNP25Q9BV90 132 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 IQCGQ9H095 443 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 NRDE2Q9H7Z3 1164 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 EIF2B3Q9NR50 452 aaKnown RBP10.62□□□□□ -0.71
TPM3-209ENST00000368527 ARHGEF3Q9NR81 526 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 ABCF3Q9NUQ8 709 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 RRN3Q9NYV6 651 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPM3-209ENST00000368527 TJP2Q9UDY2 1190 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 STAP1Q9ULZ2 295 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 PLXNB2O15031 1838 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 SCN4AP35499 1836 aa10.62□□□□□ -0.71
TPM3-209ENST00000368527 KPNA7A9QM74 516 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 H3BRJ5 948 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 GOLGA8MH3BSY2 632 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 AP3B1O00203 1094 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 HUS1O60921 280 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 GPR32O75388 356 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 TMEM63AO94886 807 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 FBXO21O94952 628 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 UNC5CO95185 931 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 CD48P09326 243 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 SMPD1P17405 629 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 FOXN2P32314 431 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 RPA3P35244 121 aaPredicted RBP10.61□□□□□ -0.71
TPM3-209ENST00000368527 GJA5P36382 358 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 GNL1P36915 607 aaPredicted RBP10.61□□□□□ -0.71
TPM3-209ENST00000368527 ELK3P41970 407 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 CRYBB1P53674 252 aaPredicted RBP10.61□□□□□ -0.71
TPM3-209ENST00000368527 YWHAGP61981 247 aaKnown RBP eCLIP10.61□□□□□ -0.71
TPM3-209ENST00000368527 ATP11AP98196 1134 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 PDE4CQ08493 712 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 PTK7Q13308 1070 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ANKRD22Q5VYY1 191 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ATG16L1Q676U5 607 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 SCARA3Q6AZY7 606 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 PMF1Q6P1K2 205 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 PRUNE1Q86TP1 453 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ACOT1Q86TX2 421 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 TTC30AQ86WT1 665 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 OR6B3Q8NGW1 331 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ACMSDQ8TDX5 336 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 SH3TC2Q8TF17 1288 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 MZB1Q8WU39 189 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 KCTD13Q8WZ19 329 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
TPM3-209ENST00000368527 SIKE1Q9BRV8 207 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 TRIM62Q9BVG3 475 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 TRIM55Q9BYV6 548 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 SLC38A7Q9NVC3 462 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ETNK2Q9NVF9 386 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 SNTG2Q9NY99 539 aa10.61□□□□□ -0.71
TPM3-209ENST00000368527 ZC3H7BQ9UGR2 993 aaKnown RBP10.61□□□□□ -0.71
TPM3-209ENST00000368527 MTO1Q9Y2Z2 717 aaKnown RBP10.61□□□□□ -0.71
TPM3-209ENST00000368527 TCRBV9S1A1TA0A576 114 aa10.6□□□□□ -0.71
TPM3-209ENST00000368527 GLTPD2A6NH11 291 aa10.6□□□□□ -0.71
TPM3-209ENST00000368527 BTBD19C9JJ37 291 aa10.6□□□□□ -0.71
TPM3-209ENST00000368527 TRAFD1O14545 582 aaPredicted RBP10.6□□□□□ -0.71
TPM3-209ENST00000368527 NCAM2O15394 837 aa10.6□□□□□ -0.71
TPM3-209ENST00000368527 PAPSS1O43252 624 aaPredicted RBP10.6□□□□□ -0.71
TPM3-209ENST00000368527 MTSS1O43312 755 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms