RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 ATP9AO75110 1047 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 ADH1CP00326 375 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 BRAFP15056 766 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 CENPCQ03188 943 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 MTF1Q14872 753 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 NR1I3Q14994 352 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-205ENST00000368213 CLEC16AQ2KHT3 1053 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-205ENST00000368213 TMEM119Q4V9L6 283 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 FAXCQ5TGI0 409 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 ANKS6Q68DC2 871 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 CPA6Q8N4T0 437 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 KIF2CQ99661 725 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 NDOR1Q9UHB4 597 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
PTPRK-205ENST00000368213 SMPD1P17405 629 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TGM2P21980 687 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 CARSP49589 748 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 RAB30Q15771 203 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 LCA5Q86VQ0 697 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 DEFB106AQ8N104 65 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 CNPY4Q8N129 248 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MYO1HQ8N1T3 1032 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MTBPQ96DY7 904 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ERGIC2Q96RQ1 377 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 CDT1Q9H211 546 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 OR6C75A6NL08 312 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 HNRNPCL2B2RXH8 293 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 HNRNPCL1O60812 293 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 NFICP08651 508 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 PAEPP09466 180 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 PTENP60484 403 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 POU4F1Q01851 419 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TP53BP2Q13625 1128 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 NOL9Q5SY16 702 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 STAMBPL1Q96FJ0 436 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 NEUROG2Q9H2A3 272 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 VANGL2Q9ULK5 521 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 FMN2Q9NZ56 1722 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 LOC102724159A0A0B4J2E5 919 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SMAPO00193 183 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SOAT2O75908 522 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 RARGP13631 454 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TLE2Q04725 743 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 STAT4Q14765 748 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 PWP2Q15269 919 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 HSDL1Q3SXM5 330 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TMCO4Q5TGY1 634 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 GRIN3AQ8TCU5 1115 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 KAT2BQ92831 832 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 KCNB2Q92953 911 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MYLPFQ96A32 169 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 C2orf49Q9BVC5 232 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 XAB2Q9HCS7 855 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ABCB6Q9NP58 842 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 PCDHB9Q9Y5E1 797 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ITIH2P19823 946 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SOAT1P35610 550 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 INPP1P49441 399 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 PSEN1P49768 467 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TUSC3Q13454 348 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MTM1Q13496 603 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ILDR2Q71H61 639 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ELMO3Q96BJ8 720 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 ACO2Q99798 780 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TCF25Q9BQ70 676 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 BBS2Q9BXC9 721 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 TMEM51Q9NW97 253 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MRPS17Q9Y2R5 130 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MYO5BQ9ULV0 1848 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SPECC1L-ADORA2AF8WAN1 911 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 PSMD12O00232 456 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MGEA5O60502 916 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 DDX39BQ13838 428 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 SETMARQ53H47 684 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 GPR158Q5T848 1215 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 DENND1CQ8IV53 801 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 HES6Q96HZ4 224 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 LRRC37BQ96QE4 947 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MLXIPLQ9NP71 852 aa11.1□□□□□ -0.63
PTPRK-205ENST00000368213 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
PTPRK-205ENST00000368213 GOLGA8RI6L899 631 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
PTPRK-205ENST00000368213 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
PTPRK-205ENST00000368213 PTPN3P26045 913 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms