RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 A0A1W2PQH9 124 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PRR5-ARHGAP8B1AHC4 643 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 AXIN1O15169 862 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GADD45BO75293 160 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RPP40O75818 363 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 KAT7O95251 611 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 APBB3O95704 486 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 RARGP13631 454 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ARHGAP8P85298 464 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LMNB2Q03252 620 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GAD2Q05329 585 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CUL2Q13617 745 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MORC3Q14149 939 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CSRP2Q16527 193 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 C2orf27AQ580R0 203 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DCAF17Q5H9S7 520 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ISM2Q6H9L7 571 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CACNA2D4Q7Z3S7 1137 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TMEM25Q86YD3 366 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ANKRD52Q8NB46 1076 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LOXL4Q96JB6 756 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SEMA4GQ9NTN9 838 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CLIC5Q9NZA1 410 aa14.41□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PSMA7O14818 248 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HNRNPLP14866 589 aaKnown RBP eCLIP14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PPP1R2P41236 205 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 GRIA2P42262 883 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TNFRSF4P43489 277 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PSEN1P49768 467 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 SEC13P55735 322 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CRY1Q16526 586 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HSF5Q4G112 596 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TCERG1LQ5VWI1 586 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 Q6ZNB5 142 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 CEP68Q76N32 757 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 BHLHA9Q7RTU4 235 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 KBTBD6Q86V97 674 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 TTC30AQ86WT1 665 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 IL17RCQ8NAC3 791 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 LMO3Q8TAP4 145 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 JAKMIP2Q96AA8 810 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 P2RY11Q96G91 374 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DUSP15Q9H1R2 295 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 METTL14Q9HCE5 456 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 MARK1Q9P0L2 795 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 NUDT5Q9UKK9 219 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 HCN2Q9UL51 889 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 USP18Q9UMW8 372 aa14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-202ENST00000366159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TULP3O75386 442 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 EPN2O95208 641 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 APODP05090 189 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 IRF1P10914 325 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SDHBP21912 280 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PLA2G4AP47712 749 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 FMO5P49326 533 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 STIM1Q13586 685 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PLK5Q496M5 336 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PLA2G2CQ5R387 149 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 EMC10Q5UCC4 262 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TMEM92Q6UXU6 159 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PIGZQ86VD9 579 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KCNV2Q8TDN2 545 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ARHGEF4Q9NR80 690 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 DNMT3LQ9UJW3 386 aa14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CIZ1Q9ULV3 898 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SPAG17Q6Q759 2223 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 SGK1O00141 431 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TULP2O00295 520 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MDM4O15151 490 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TRIM24O15164 1050 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ADAM23O75077 832 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 STC2O76061 302 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KLKB1P03952 638 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 MARSP56192 900 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PKDCCQ504Y2 493 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PRR23CQ6ZRP0 262 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 DGLUCYQ7Z3D6 616 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NAT16Q8N8M0 369 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 OLIG1Q8TAK6 271 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CNOT6LQ96LI5 555 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NACA2Q9H009 215 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 DEC1Q9P2X7 70 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 FBXO10Q9UK96 956 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
TNFRSF1A-202ENST00000366159 P4HA2O15460 535 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CACNG3O60359 315 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CISD3P0C7P0 127 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 CCDC192P0DO97 292 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 TIE1P35590 1138 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 DGKEP52429 567 aa14.37□□□□□ -0.11
TNFRSF1A-202ENST00000366159 KDSRQ06136 332 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms