RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ATF7P17544 494 aaPredicted RBP5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 HTR7P34969 479 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 GNALP38405 381 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZNF81P51508 661 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 COPAP53621 1224 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 EIF4A1P60842 406 aaKnown RBP5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 MIS18BP1Q6P0N0 1132 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 TMEM65Q6PI78 240 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 NEK8Q86SG6 692 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 PJA1Q8NG27 643 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 SNX15Q9NRS6 342 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 STEAP1Q9UHE8 339 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 WDR17Q8IZU2 1322 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 UBE2Q2LH0YL09 131 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 CLIC1O00299 241 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 APOL1O14791 398 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 TMPRSS11DO60235 418 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 NDST3O95803 873 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 CD19P15391 556 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 CERS1P27544 350 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 RBL1P28749 1068 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 KLF9Q13886 244 aaPredicted RBP5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 SEC23BQ15437 767 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 CERKLQ49MI3 558 aaPredicted RBP5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 KIAA1614Q5VZ46 1190 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 HIBCHQ6NVY1 386 aaPredicted RBP5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZNF668Q96K58 619 aaPredicted RBP5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 FAM227BQ96M60 508 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 HS6ST2Q96MM7 605 aa5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 RGS17Q9UGC6 210 aaPredicted RBP5.38□□□□□ -1.55
RNU4-28P-201ENST00000364739 M0R3H8 397 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 FOXN3O00409 490 aaPredicted RBP5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 AREL1O15033 823 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 FYB1O15117 783 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 TP73O15350 636 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 PRAMEF2O60811 474 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 TMEM225BP0DP42 221 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 ARP10275 920 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 HARSP12081 509 aaKnown RBP5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 PBX1P40424 430 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 SSBP2P81877 361 aaPredicted RBP5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 MFSD13AQ14CX5 517 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 RAP1GAP2Q684P5 730 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 IL31Q6EBC2 164 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 MZT2AQ6P582 158 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 DCDC5Q6ZRR9 648 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 KRT28Q7Z3Y7 464 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 P3H2Q8IVL5 708 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 LINC01465Q8N7H1 131 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 C12orf76Q8N812 135 aaPredicted RBP5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 EDC3Q96F86 508 aaKnown RBP5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 FYTTD1Q96QD9 318 aaKnown RBP5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 SAP30LQ9HAJ7 183 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 MYO1AQ9UBC5 1043 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 VPS4AQ9UN37 437 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 MAN2B2Q9Y2E5 1009 aa5.37□□□□□ -1.55
RNU4-28P-201ENST00000364739 A8MVJ9 347 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 TMEM232C9JQI7 657 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 CHRM5P08912 532 aaPredicted RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 MYL4P12829 197 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ADRA1DP25100 572 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 GPC5P78333 572 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 MTAPQ13126 283 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 IFIT5Q13325 482 aaKnown RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 SLC14A1Q13336 389 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 PMS2P11Q13670 270 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 DAZAP2Q15038 168 aaPredicted RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ETFDHQ16134 617 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 LONRF1Q17RB8 773 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ARL13BQ3SXY8 428 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 FAM209BQ5JX69 171 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 RANBP10Q6VN20 620 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 KIAA0408Q6ZU52 694 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 TXLNBQ8N3L3 684 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 GALNT16Q8N428 558 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 FAM71DQ8N9W8 422 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 SUN3Q8TAQ9 357 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZDHHC12Q96GR4 267 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 KAZALD1Q96I82 304 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 VPS50Q96JG6 964 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 MAGEB5Q9BZ81 275 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 SPRTNQ9H040 489 aaPredicted RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 NRIP3Q9NQ35 241 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 TRIM36Q9NQ86 728 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 VPS45Q9NRW7 570 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 FNIP2Q9P278 1114 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZNF70Q9UC06 446 aaPredicted RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZMYND8Q9ULU4 1186 aaPredicted RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 SCAF8Q9UPN6 1271 aaKnown RBP5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 PCDHB2Q9Y5E7 798 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 COL15A1P39059 1388 aa5.36□□□□□ -1.55
RNU4-28P-201ENST00000364739 ZNF804BA4D1E1 1349 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 A0A1W2PPC4 97 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 FCHO1O14526 889 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 COQ9O75208 318 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 USP1O94782 785 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 WDR47O94967 919 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 TNFSF4P23510 183 aa5.35□□□□□ -1.55
RNU4-28P-201ENST00000364739 GALNSP34059 522 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms