RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 SPSB4Q96A44 273 aa5.4□□□□□ -1.54
RNU4-40P-201ENST00000364351 ZNF518BQ9C0D4 1074 aa5.4□□□□□ -1.54
RNU4-40P-201ENST00000364351 TRIM36Q9NQ86 728 aa5.4□□□□□ -1.54
RNU4-40P-201ENST00000364351 HOMER2Q9NSB8 354 aa5.4□□□□□ -1.54
RNU4-40P-201ENST00000364351 NKX1-2Q9UD57 310 aaPredicted RBP5.4□□□□□ -1.54
RNU4-40P-201ENST00000364351 C4orf47A7E2U8 309 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 H3BML4 177 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 PGDP52209 483 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 HYAL1Q12794 435 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 KPNB1Q14974 876 aaKnown RBP5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 EARS2Q5JPH6 523 aaKnown RBP5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 C18orf65Q6ZTR6 163 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 C11orf44Q8N8P7 122 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 PPP1R35Q8TAP8 253 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 MAML1Q92585 1016 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 KAZALD1Q96I82 304 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 TMEM45AQ9NWC5 275 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 ICKQ9UPZ9 632 aa5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 TTBK1Q5TCY1 1321 aaPredicted RBP5.39□□□□□ -1.55
RNU4-40P-201ENST00000364351 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 AGPSO00116 658 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 RASSF9O75901 435 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 SYF2O95926 243 aaKnown RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 CDC25AP30304 524 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 IL6STP40189 918 aaPredicted RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 PTDSS1P48651 473 aaKnown RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 NEK2P51955 445 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 B4GALNT1Q00973 533 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 PRTGQ2VWP7 1150 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 COL23A1Q86Y22 540 aaPredicted RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 CHPFQ8IZ52 775 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 DCP1BQ8IZD4 617 aaKnown RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 HOOK2Q96ED9 719 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 TRMT61AQ96FX7 289 aaKnown RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 TM2D2Q9BX73 214 aa5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 MRPL44Q9H9J2 332 aaKnown RBP5.38□□□□□ -1.55
RNU4-40P-201ENST00000364351 C2CD4BA6NLJ0 364 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 PHGDHO43175 533 aaKnown RBP5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 RRP9O43818 475 aaKnown RBP5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 SLC28A2O43868 658 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 PLAUP00749 431 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 FGF2P09038 288 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 CD19P15391 556 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 EN2P19622 333 aaPredicted RBP5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 SLC7A1P30825 629 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 GPC5P78333 572 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 STK3Q13188 491 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 METTL25Q8N6Q8 603 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 PNPLA1Q8N8W4 532 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 FAM71DQ8N9W8 422 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 B4GALNT2Q8NHY0 566 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 LRGUKQ96M69 825 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 NUAK2Q9H093 628 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 TMEM8AQ9HCN3 771 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 PCDH12Q9NPG4 1184 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 ARL8BQ9NVJ2 186 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 FZD4Q9ULV1 537 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 COL4A3BPQ9Y5P4 624 aa5.37□□□□□ -1.55
RNU4-40P-201ENST00000364351 RRHO14718 337 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 CCP110O43303 1012 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 PIAS2O75928 621 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 PARP1P09874 1014 aaKnown RBP5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 ADRA1DP25100 572 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 USP43Q70EL4 1123 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 B4GALNT4Q76KP1 1039 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 IL31RAQ8NI17 732 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 ZNF479Q96JC4 524 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 VPS50Q96JG6 964 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 ACO2Q99798 780 aaKnown RBP5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 STK31Q9BXU1 1019 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 SACM1LQ9NTJ5 587 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 COG5Q9UP83 839 aa5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 SIRT4Q9Y6E7 314 aaPredicted RBP5.36□□□□□ -1.55
RNU4-40P-201ENST00000364351 EME2A4GXA9 379 aaPredicted RBP5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 A8MVJ9 347 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 PYCARD-AS1I3L0S3 204 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 TBX3O15119 743 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 MARCH6O60337 910 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 NDUFB8O95169 186 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 HSPA6P17066 643 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 TXNL4AP83876 142 aaKnown RBP5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 ZXDBP98169 803 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 KRTAP27-1Q3LI81 207 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 FAM57BQ71RH2 274 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 TMEM204Q9BSN7 226 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 ATP6V0A4Q9HBG4 840 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 MLXIPLQ9NP71 852 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 DECR2Q9NUI1 292 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 STEAP1Q9UHE8 339 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 HDAC9Q9UKV0 1011 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 RIMKLBQ9ULI2 386 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 PAXBP1Q9Y5B6 917 aa5.35□□□□□ -1.55
RNU4-40P-201ENST00000364351 USP19O94966 1318 aa5.34□□□□□ -1.55
RNU4-40P-201ENST00000364351 MBD3L4A6NDZ8 208 aaPredicted RBP5.34□□□□□ -1.55
RNU4-40P-201ENST00000364351 MBD3L3A6NE82 208 aaPredicted RBP5.34□□□□□ -1.55
RNU4-40P-201ENST00000364351 FOXN3O00409 490 aaPredicted RBP5.34□□□□□ -1.55
RNU4-40P-201ENST00000364351 CTIFO43310 598 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms