RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ARHGEF19Q8IW93 802 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SYNE4Q8N205 404 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 FSTL5Q8N475 847 aaPredicted RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SUPT20HQ8NEM7 779 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 CHST13Q8NET6 341 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SSH3Q8TE77 659 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC25A43Q8WUT9 341 aaPredicted RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 AFG1LQ8WV93 481 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 OVCA2Q8WZ82 227 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 GLG1Q92896 1179 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 ELAC1Q9H777 363 aaKnown RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 GLOD4Q9HC38 313 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 WASH6PQ9NQA3 447 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 NDUFAF4Q9P032 175 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 NKX1-2Q9UD57 310 aaPredicted RBP4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SLC13A4Q9UKG4 626 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 FZD1Q9UP38 647 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 SH2B3Q9UQQ2 575 aa4.29□□□□□ -1.72
RNU6-28P-201ENST00000362378 ADGRA2Q96PE1 1338 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 A8MVJ9 347 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 TISP43B9A030 160 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 E7EVH7 732 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 K7ESM1 405 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 HOXC11O43248 304 aaPredicted RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CTIFO43310 598 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 PPP6R2O75170 966 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 LARGE1O95461 756 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 VNN1O95497 513 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CER1O95813 267 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 ONECUT2O95948 504 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 POLBP06746 335 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 JUPP14923 745 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 PBX1P40424 430 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 MCM2P49736 904 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 SEC24CP53992 1094 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 DDX10Q13206 875 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 TP53BP2Q13625 1128 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 SIM2Q14190 667 aaPredicted RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 KCNJ12Q14500 433 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 NFIXQ14938 502 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 SF3B3Q15393 1217 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 ST3GAL2Q16842 350 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 ZNF618Q5T7W0 954 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 TTLL10Q6ZVT0 673 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 RHOUQ7L0Q8 258 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 RRAGAQ7L523 313 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CAND1Q86VP6 1230 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 LRRC71Q8N4P6 559 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 C11orf44Q8N8P7 122 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 PPHLN1Q8NEY8 458 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CXorf38Q8TB03 319 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 MYCBPAPQ8TBZ2 947 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CSGALNACT1Q8TDX6 532 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CPT1BQ92523 772 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 EXTL1Q92935 676 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 FKBP10Q96AY3 582 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 LENG9Q96B70 501 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 C3orf49Q96BT1 292 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CTHRC1Q96CG8 243 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 PTCD3Q96EY7 689 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 PGBD1Q96JS3 809 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 MAELQ96JY0 434 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 C20orf173Q96LM9 149 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 CDK5RAP1Q96SZ6 601 aaKnown RBP4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 SENP7Q9BQF6 1050 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 TBCCD1Q9NVR7 557 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 RAPGEFL1Q9UHV5 662 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 GABRQQ9UN88 632 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 TMEM98Q9Y2Y6 226 aa4.28□□□□□ -1.72
RNU6-28P-201ENST00000362378 LOC105369274A0A096LPK9 316 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 LOC102723532A0A0G2JNH3 316 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 CENPVL1A0A0U1RR11 272 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 WDR27A2RRH5 827 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 UNC119BA6NIH7 251 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 PSMD9O00233 223 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 TFRCP02786 760 aaKnown RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 CNPP09543 421 aaKnown RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 TMEM225BP0DP42 221 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 EGR2P11161 476 aaPredicted RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 CNTFP26441 200 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 LIPAP38571 399 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 DGKQP52824 942 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 EIF4A1P60842 406 aaKnown RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 VAMP2P63027 116 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 PLP2Q04941 152 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 PTPRRQ15256 657 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 TBCCQ15814 346 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 GALNTL6Q49A17 601 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 TIGD2Q4W5G0 525 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 USP39Q53GS9 565 aaKnown RBP4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 CCDC144NLQ6NUI1 221 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 BBS12Q6ZW61 710 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 OR4N4Q8N0Y3 316 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 ESX1Q8N693 406 aa4.27□□□□□ -1.73
RNU6-28P-201ENST00000362378 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms