RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TRNAU1APQ9NX07 287 aaKnown RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 DMTF1Q9Y222 760 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GAKO14976 1311 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CSPG5O95196 566 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CRTAMO95727 393 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ITGB5P18084 799 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 MX2P20592 715 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 SERPINB5P36952 375 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 SLC5A3P53794 718 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CCNIQ14094 377 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 UGCGQ16739 394 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 UGT2A3Q6UWM9 527 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 EMC1Q8N766 993 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 PPP4R1Q8TF05 950 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ZBTB45Q96K62 511 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 THEGQ9P2T0 379 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GNEQ9Y223 722 aaKnown RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 POMPQ9Y244 141 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GOLGA8QA0A0J9YX86 632 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GOLGA8OA6NCC3 632 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GOLGA8NF8WBI6 632 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 H7C0C1 242 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 OCM2P0CE71 109 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 OCMP0CE72 109 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ENO3P13929 434 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ZNF24P17028 368 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 PAX3P23760 479 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 KLRC2P26717 231 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 RPL10P27635 214 aaKnown RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ATP5OP48047 213 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ARHGEF16Q5VV41 709 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 FAM198AQ9UFP1 575 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 GIPC1O14908 333 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 ATP9BO43861 1147 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 E2F6O75461 281 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 GRAP2O75791 330 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 HLA-DRAP01903 254 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 NPTX2P47972 431 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 HADHBP55084 474 aaKnown RBP13.15□□□□□ -0.3
VAMP1-201ENST00000361716 GDF10P55107 478 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
VAMP1-201ENST00000361716 MORF4L2Q15014 288 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 TXNRD3NBQ6F5E7 133 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 TTC13Q8NBP0 860 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 RIN3Q8TB24 985 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 MKL1Q969V6 931 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 EME1Q96AY2 570 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 CCDC28BQ9BUN5 200 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 INIPQ9NRY2 104 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 PIH1D1Q9NWS0 290 aaKnown RBP13.15□□□□□ -0.3
VAMP1-201ENST00000361716 KCNK4Q9NYG8 393 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 SPATA7Q9P0W8 599 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 IGLV3-22A0A075B6J6 115 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 PROSCO94903 275 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 NUDT2P50583 147 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-201ENST00000361716 PSMC5P62195 406 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 DMPKQ09013 629 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 PRKG1Q13976 671 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 CLEC16AQ2KHT3 1053 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 EFHC2Q5JST6 749 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 NXNQ6DKJ4 435 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 SIAH1Q8IUQ4 282 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 CPNE9Q8IYJ1 553 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 SMYD1Q8NB12 490 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 LMO3Q8TAP4 145 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 GRIN3AQ8TCU5 1115 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 SLCO2A1Q92959 643 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.3
VAMP1-201ENST00000361716 ALKBH8Q96BT7 664 aaKnown RBP13.15□□□□□ -0.3
VAMP1-201ENST00000361716 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 CORO1BQ9BR76 489 aa13.15□□□□□ -0.3
VAMP1-201ENST00000361716 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 NDUFB5O43674 189 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 CST8O60676 142 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 SMIM18P0DKX4 95 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 HOXD12P35452 270 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 ETFBP38117 255 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
VAMP1-201ENST00000361716 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 RSL24D1Q9UHA3 163 aaKnown RBP13.14□□□□□ -0.31
VAMP1-201ENST00000361716 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 TRIM17Q9Y577 477 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 MYH11P35749 1972 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 CENPFP49454 3210 aa13.14□□□□□ -0.31
VAMP1-201ENST00000361716 CASQ2O14958 399 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms