RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 RNF43Q68DV7 783 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 C1orf228Q6PIY5 440 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 TBC1D1Q86TI0 1168 aaPredicted RBP23.54■■□□□ 1.36
LDB1-201ENST00000361198 TRABD2AQ86V40 505 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 ANKMY2Q8IV38 441 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 TEKT4Q8WW24 435 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 VPS37BQ9H9H4 285 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 PCDH18Q9HCL0 1135 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 TRPM7Q96QT4 1865 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 DCAF8L1A6NGE4 600 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 AKR1A1P14550 325 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 WDR4P57081 412 aaKnown RBP23.53■■□□□ 1.36
LDB1-201ENST00000361198 ROR1Q01973 937 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 SV2CQ496J9 727 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 FAM182AQ5T1J6 154 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 DARS2Q6PI48 645 aaKnown RBP23.53■■□□□ 1.36
LDB1-201ENST00000361198 PLD5Q8N7P1 536 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 TRPV1Q8NER1 839 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 ZFP42Q96MM3 310 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 TSPAN18Q96SJ8 248 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 CEP350Q5VT06 3117 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 PTGESO14684 152 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 TMEM63AO94886 807 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 NQO1P15559 274 aaKnown RBP23.53■■□□□ 1.36
LDB1-201ENST00000361198 MAP2K2P36507 400 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 ATXN1P54253 815 aaKnown RBP23.53■■□□□ 1.36
LDB1-201ENST00000361198 SLC26A9Q7LBE3 791 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 SAPCD2Q86UD0 394 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 ADGRF2Q8IZF7 708 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 FITM2Q8N6M3 262 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 PQLC3Q8N755 202 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 TBCBQ99426 244 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 ECT2Q9H8V3 914 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 GGT7Q9UJ14 662 aa23.53■■□□□ 1.36
LDB1-201ENST00000361198 HUS1O60921 280 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 TKTP29401 623 aaKnown RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 STIP1P31948 543 aaKnown RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 FOXN2P32314 431 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 RPL34P49207 117 aaKnown RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 BASP1P80723 227 aaKnown RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 IL9RQ01113 521 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 RASA2Q15283 850 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 TMED2Q15363 201 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 RGMBQ6NW40 437 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 OSTM1Q86WC4 334 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 PCDH19Q8TAB3 1148 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 C11orf84Q9BUA3 381 aaPredicted RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 MEIS3P2A8K0S8 358 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 POC1B-GALNT4F8VUJ3 575 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 MDM4O15151 490 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 PRPF4O43172 522 aaKnown RBP eCLIP23.52■■□□□ 1.363e-6■■■□□ 16.6
LDB1-201ENST00000361198 ASMTLO95671 621 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 IGFBP6P24592 240 aaPredicted RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 GPX6P59796 221 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 ADCY1Q08828 1119 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 MTM1Q13496 603 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 ZKSCAN8Q15776 578 aaPredicted RBP23.52■■□□□ 1.36
LDB1-201ENST00000361198 TAF2Q6P1X5 1199 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 CEP57Q86XR8 500 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 DENND1AQ8TEH3 1009 aa23.52■■□□□ 1.36
LDB1-201ENST00000361198 H7C0C1 242 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 PTPN9P43378 593 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 ATP5OP48047 213 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 ARL4CP56559 192 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 PPP6R3Q5H9R7 873 aaPredicted RBP23.51■■□□□ 1.35
LDB1-201ENST00000361198 WDR83Q9BRX9 315 aaKnown RBP23.51■■□□□ 1.35
LDB1-201ENST00000361198 KLHL14Q9P2G3 628 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 HEY1Q9Y5J3 304 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 CLUHO75153 1309 aa23.51■■□□□ 1.35
LDB1-201ENST00000361198 DUSP11O75319 330 aaKnown RBP23.5■■□□□ 1.35
LDB1-201ENST00000361198 DESP17661 470 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 CRHR2Q13324 411 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 GNASQ5JWF2 1037 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 RGS9BPQ6ZS82 235 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 RMDN2Q96LZ7 410 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 PPCSQ9HAB8 311 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 USP29Q9HBJ7 922 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 ZFYVE28Q9HCC9 887 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 CACNG4Q9UBN1 327 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 BAIAP2L1Q9UHR4 511 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 XPO7Q9UIA9 1087 aaKnown RBP23.5■■□□□ 1.35
LDB1-201ENST00000361198 MCM8Q9UJA3 840 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 APOL1O14791 398 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 MAP3K6O95382 1288 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 ALADP13716 330 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 BCAR1P56945 870 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 KCNJ2P63252 427 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 MGAT5Q09328 741 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 CCDC15Q0P6D6 951 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 SLC9A4Q6AI14 798 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 ASRGL1Q7L266 308 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 B3GALNT2Q8NCR0 500 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 PYROXD1Q8WU10 500 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 CENPIQ92674 756 aaPredicted RBP23.5■■□□□ 1.35
LDB1-201ENST00000361198 TNIP3Q96KP6 325 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 PPP1R10Q96QC0 940 aaKnown RBP23.5■■□□□ 1.35
LDB1-201ENST00000361198 PITPNM3Q9BZ71 974 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 MAGEB5Q9BZ81 275 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 PHACTR1Q9C0D0 580 aa23.5■■□□□ 1.35
LDB1-201ENST00000361198 ARHGEF3Q9NR81 526 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms