RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 CDCA2Q69YH5 1023 aaPredicted RBP12.93□□□□□ -0.34
UBA3-202ENST00000361055 CLNKQ7Z7G1 428 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 FBXO36Q8NEA4 188 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 NLRP4Q96MN2 994 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 CYTH2Q99418 400 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
UBA3-202ENST00000361055 NFKBIZQ9BYH8 718 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 PHF24Q9UPV7 400 aa12.93□□□□□ -0.34
UBA3-202ENST00000361055 LRCH4O75427 683 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 BANF1O75531 89 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 MT-ND3P03897 115 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 VTNP04004 478 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 ADRA1DP25100 572 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 IL1R2P27930 398 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 STIP1P31948 543 aaKnown RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 GDF10P55107 478 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 DPYSL3Q14195 570 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 ZNF394Q53GI3 561 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 CYP4A22Q5TCH4 519 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 GDF6Q6KF10 455 aaPredicted RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 TAF2Q6P1X5 1199 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 DENND1BQ6P3S1 775 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 MTDHQ86UE4 582 aaKnown RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 ZBTB8OSQ8IWT0 167 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 ACO2Q99798 780 aaKnown RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 TRIM55Q9BYV6 548 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 MTMR12Q9C0I1 747 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 ZWILCHQ9H900 591 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 NPHS2Q9NP85 383 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 STARD7Q9NQZ5 370 aa12.92□□□□□ -0.34
UBA3-202ENST00000361055 SAE1Q9UBE0 346 aaPredicted RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
UBA3-202ENST00000361055 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 CCDC22O60826 627 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 DNAJC6O75061 913 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 CBX6O95503 412 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 IL1BP01584 269 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 DHRS4L1P0CG22 281 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 HARSP12081 509 aaKnown RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 GAD2Q05329 585 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 SLC18A2Q05940 514 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 BLMHQ13867 455 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 TAF11Q15544 211 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 ZNF449Q6P9G9 518 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 CHSY1Q86X52 802 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 UNC45BQ8IWX7 931 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 NME8Q8N427 588 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 FAXDC2Q96IV6 333 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 NUDCD1Q96RS6 583 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 WDR83Q9BRX9 315 aaKnown RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 FAM49AQ9H0Q0 323 aaPredicted RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 XYLT2Q9H1B5 865 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 KANSL3Q9P2N6 904 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 XPO7Q9UIA9 1087 aaKnown RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 MTO1Q9Y2Z2 717 aaKnown RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 APOC4-APOC2K7ER74 178 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 SPAG6O75602 509 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 FAM155BO75949 473 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 APOC2P02655 101 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 GM2AP17900 193 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 EPHB2P29323 1055 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 GCKP35557 465 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 PSMC1P62191 440 aaKnown RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 DYNLT1P63172 113 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 EFTUD2Q15029 972 aaKnown RBP eCLIP12.91□□□□□ -0.341e-10■■■■■ 73.3
UBA3-202ENST00000361055 BBS9Q3SYG4 887 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 ZBTB33Q86T24 672 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 ZNF410Q86VK4 478 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 KIRREL3Q8IZU9 778 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 DNAJB3Q8WWF6 145 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 IFT122Q9HBG6 1241 aa12.91□□□□□ -0.34
UBA3-202ENST00000361055 CORO1CQ9ULV4 474 aaPredicted RBP12.91□□□□□ -0.34
UBA3-202ENST00000361055 A0A087WZ62 844 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 TCRBV7S3A2A0A539 114 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 TTLL13PA6NNM8 815 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 RPLP2P05387 115 aaKnown RBP12.9□□□□□ -0.34
UBA3-202ENST00000361055 ASPAP45381 313 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 PHKA2P46019 1235 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 RAD23BP54727 409 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
UBA3-202ENST00000361055 ZNF699Q32M78 642 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.34
UBA3-202ENST00000361055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBA3-202ENST00000361055 SLC43A3Q8NBI5 491 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms