RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RFX7Q2KHR2 1363 aa13.6□□□□□ -0.23
SRGAP3-201ENST00000360413 NR5A2O00482 541 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 SULT1E1P49888 294 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 HIRAP54198 1017 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 SHC4Q6S5L8 630 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 STK32AQ8WU08 396 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 LPAR1Q92633 364 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF222Q9UK12 451 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 FOXN1O15353 648 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PHKG2P15735 406 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 NME5P56597 212 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 VN1R5Q7Z5H4 357 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 FNIP1Q8TF40 1166 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 CRELD1Q96HD1 420 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PCDHB7Q9Y5E2 793 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ADRA2BP18089 450 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 FDFT1P37268 417 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 CASP4P49662 377 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 SLC20A2Q08357 652 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PEX6Q13608 980 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 DCAF6Q58WW2 860 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PERM1Q5SV97 790 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 DGCR6LQ9BY27 220 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 RAD18Q9NS91 495 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 KCNJ1P48048 391 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PLA2G4FQ68DD2 849 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 MMADHCQ9H3L0 296 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 GDF11O95390 407 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 GRK4P32298 578 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PRMT9Q6P2P2 845 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 METTL16Q86W50 562 aaKnown RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 EID3Q8N140 333 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 NUAK2Q9H093 628 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 SENP2Q9HC62 589 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 APEX2Q9UBZ4 518 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 TMEM114B3SHH9 223 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 SSNA1O43805 119 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ADORA2BP29275 332 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 LRPAP1P30533 357 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 CPT1AP50416 773 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 ACAP1Q15027 740 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 AKAP14Q86UN6 197 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 CCDC33Q8N5R6 958 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PIF1Q9H611 641 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 PCDHA10Q9Y5I2 948 aa13.59□□□□□ -0.23
SRGAP3-201ENST00000360413 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 H3BQF6 201 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 COILP38432 576 aaPredicted RBP13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 EXOSC10Q01780 885 aaKnown RBP13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 CENPCQ03188 943 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 REPS1Q96D71 796 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 GREM2Q9H772 168 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 KLHL1Q9NR64 748 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 WWOXQ9NZC7 414 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 CRLS1Q9UJA2 301 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 TPRKBQ9Y3C4 175 aa13.58□□□□□ -0.23
SRGAP3-201ENST00000360413 CLOCKO15516 846 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 FSBPO95073 299 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 LRG1P02750 347 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 STAG3L1P0CL83 205 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 CNTFP26441 200 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 NOS3P29474 1203 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 PLD1Q13393 1074 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 CDH18Q13634 790 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 TTC27Q6P3X3 843 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 UTP15Q8TED0 518 aaKnown RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 HPS1Q92902 700 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 CLCC1Q96S66 551 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 GPC1P35052 558 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 SLC11A2P49281 568 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 CHN2P52757 468 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 MAD2L1Q13257 205 aaPredicted RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 XRCC4Q13426 336 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 KYQ8NBH2 561 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 CINPQ9BW66 212 aaPredicted RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 PNMA8BQ9ULN7 279 aaPredicted RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 NFYCQ13952 458 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 RASSF6Q6ZTQ3 369 aa13.58□□□□□ -0.24
SRGAP3-201ENST00000360413 BSNDQ8WZ55 320 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms