RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PHF20Q9BVI0 1012 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SLC39A8Q9C0K1 460 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 V9GYQ6 96 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 PXDNLA1KZ92 1463 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SUPT7LO94864 414 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 CKMP06732 381 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 CARNMT1Q8N4J0 409 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 FAM84BQ96KN1 310 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 QRFPRQ96P65 431 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 MYLK2Q9H1R3 596 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ZNF70Q9UC06 446 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 MTA2O94776 668 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 VDRP11473 427 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 PSMC3P17980 439 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 BRD2P25440 801 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 EXOSC10Q01780 885 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 PADI4Q9UM07 663 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ZCCHC11Q5TAX3 1644 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 GUCY1B2O75343 617 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 GRAP2O75791 330 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 MAPKAPK2P49137 400 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 PACSIN1Q9BY11 444 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 KATNA1O75449 491 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 LARGE1O95461 756 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 CALB2P22676 271 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 RPA1P27694 616 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ZDHHC17Q8IUH5 632 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SLITRK2Q9H156 845 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 GGA3Q9NZ52 723 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 B3GAT3O94766 335 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 ICAM1P05362 532 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 FEN1P39748 380 aaKnown RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 PLCL1Q15111 1095 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 PPP1R16AQ96I34 528 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 ELOVL6Q9H5J4 265 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 KCNH7Q9NS40 1196 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 GALNT8Q9NY28 637 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 RBP3P10745 1247 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 HOXB8P17481 243 aaPredicted RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 CUL2Q13617 745 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 ANKMY2Q8IV38 441 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 FAM45AQ8TCE6 357 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 IARS2Q9NSE4 1012 aaKnown RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 MYH2Q9UKX2 1941 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 TCN1P20061 433 aaPredicted RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 NOS3P29474 1203 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 HNRNPH2P55795 449 aaKnown RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 CCDC153Q494R4 210 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 PMF1Q6P1K2 205 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 MS4A14Q96JA4 679 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 TBCBQ99426 244 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 VANGL2Q9ULK5 521 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 CEP152O94986 1710 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 RAD51BO15315 384 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 KRT34O76011 436 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 TAF13Q15543 124 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 CTXN3Q4LDR2 81 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 VTA1Q9NP79 307 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 MBD2Q9UBB5 411 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 USP18Q9UMW8 372 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 PEX1O43933 1283 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 AP1G2O75843 785 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 CCL15Q16663 113 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 EID3Q8N140 333 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 DPF3Q92784 378 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 POP5Q969H6 163 aaKnown RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 IL1RL2Q9HB29 575 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 MTRF1O75570 445 aaKnown RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 ZNF135P52742 658 aaPredicted RBP9.96□□□□□ -0.81
CUX1-203ENST00000360264 NR1I3Q14994 352 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 MAML3Q96JK9 1138 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 TSC22D4Q9Y3Q8 395 aa9.96□□□□□ -0.81
CUX1-203ENST00000360264 CCT8L1PA6NM43 557 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 RTN3O95197 1032 aaPredicted RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 PDHBP11177 359 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 NAB1Q13506 487 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 PGS1Q32NB8 556 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 METTL16Q86W50 562 aaKnown RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 STK40Q8N2I9 435 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 TBX20Q9UMR3 447 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 IQGAP3Q86VI3 1631 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 SNUPNO95149 360 aaKnown RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 TRIP10Q15642 601 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 ATP6AP1LQ52LC2 224 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 SLC45A4Q5BKX6 768 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 HLA-DQA1Q5Y7H0 255 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 RTL3Q8N8U3 475 aaKnown RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 DNAJC1Q96KC8 554 aaKnown RBP9.96□□□□□ -0.82
CUX1-203ENST00000360264 APOL4Q9BPW4 351 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 TRPC4Q9UBN4 977 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 PPP2R3BQ9Y5P8 575 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 hCG_2014768A0A024R1R8 64 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 GNRH1P01148 92 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 PIK3CGP48736 1102 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 NEK5Q6P3R8 708 aa9.96□□□□□ -0.82
CUX1-203ENST00000360264 ADSSL1Q8N142 457 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms