RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 TOGARAM2Q6ZUX3 1019 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 VPS36Q86VN1 386 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 MIB1Q86YT6 1006 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SCML4Q8N228 414 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CLEC4CQ8WTT0 213 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CPA5Q8WXQ8 436 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 EDEM1Q92611 657 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PLA2G2FQ9BZM2 168 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 RNF38Q9H0F5 515 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CCL26Q9Y258 94 aa20.09■□□□□ 0.81
HLA-DRB1-201ENST00000360004 LEFTY2O00292 366 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 NARSO43776 548 aaKnown RBP20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 GYPCP04921 128 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 SRFP11831 508 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 IFNAR2P48551 515 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PGFP49763 221 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 PFKPQ01813 784 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 MTF1Q14872 753 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ARHGAP29Q52LW3 1261 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 TMEM110Q86TL2 294 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DRC7Q8IY82 874 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 WDTC1Q8N5D0 677 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CSGALNACT1Q8TDX6 532 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 IRF7Q92985 503 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 C18orf8Q96DM3 657 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 HAUS4Q9H6D7 363 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 OSER1Q9NX31 292 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 AIPL1Q9NZN9 384 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 CFAP97Q9P2B7 532 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 LSM7Q9UK45 103 aaKnown RBP20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 DUSP12Q9UNI6 340 aa20.08■□□□□ 0.81
HLA-DRB1-201ENST00000360004 ZNF638Q14966 1978 aaKnown RBP20.08■□□□□ 0.8
HLA-DRB1-201ENST00000360004 MDM4O15151 490 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 TBX18O95935 607 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CHRNB2P17787 502 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CDH5P33151 784 aaPredicted RBP20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 NOMO3P69849 1222 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 PTPN20Q4JDL3 420 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 EFHC1Q5JVL4 640 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 IRF2BP2Q7Z5L9 587 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 RSPRY1Q96DX4 576 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 MARCH2Q9P0N8 246 aa20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 BZW2Q9Y6E2 419 aaKnown RBP20.07■□□□□ 0.8
HLA-DRB1-201ENST00000360004 GOLGA8SH3BPF8 625 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 PAPSS1O43252 624 aaPredicted RBP20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 OBSL1O75147 1896 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 OLFM2O95897 454 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ERBB2P04626 1255 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 HMBSP08397 361 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SKILP12757 684 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 NCAM1P13591 858 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 RPL34P49207 117 aaKnown RBP20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ZNF75DP51815 510 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 GPC5P78333 572 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ZXDAP98168 799 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CLEC16AQ2KHT3 1053 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 FAM183BPQ6ZVS7 135 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ZDHHC17Q8IUH5 632 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SYN2Q92777 582 aaPredicted RBP20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 C11orf70Q9BRQ4 267 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SMOC2Q9H3U7 446 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 TJP2Q9UDY2 1190 aa20.06■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SLC12A8A0AV02 714 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 DLL1O00548 723 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CHADO15335 359 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 GABBR2O75899 941 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CYP1A1P04798 512 aaPredicted RBP20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SERPING1P05155 500 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 YWHAZP63104 245 aaKnown RBP20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 COG7P83436 770 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 USP4Q13107 963 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ZNF77Q15935 545 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 FAM102AQ5T9C2 384 aaPredicted RBP20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 PPP1R2P3Q6NXS1 205 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 KLHDC10Q6PID8 442 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 MMS22LQ6ZRQ5 1243 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 HFE2Q6ZVN8 426 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SLC30A5Q8TAD4 765 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ZFYVE19Q96K21 471 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 POPDC2Q9HBU9 364 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 GKN1Q9NS71 199 aa20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 DUS2Q9NX74 493 aaKnown RBP20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 NUP210Q8TEM1 1887 aaPredicted RBP20.05■□□□□ 0.8
HLA-DRB1-201ENST00000360004 TMCO5BA8MYB1 307 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 STK25O00506 426 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SLC9A3R1O14745 358 aaPredicted RBP20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 AP5Z1O43299 807 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 HSF2BPO75031 334 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 GRAP2O75791 330 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CALB1P05937 261 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 PRKCIP41743 596 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 KPNA1P52294 538 aaPredicted RBP20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 RNASE9P60153 205 aaKnown RBP20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 SLC6A3Q01959 620 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 FCHO2Q0JRZ9 810 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 BHLHA9Q7RTU4 235 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 CNGA4Q8IV77 575 aa20.04■□□□□ 0.8
HLA-DRB1-201ENST00000360004 ZNF276Q8N554 614 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms