RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 KLHL24Q6TFL4 600 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 IFNEQ86WN2 208 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 RIBC1Q8N443 379 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 KCNV2Q8TDN2 545 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 TMEM159Q96B96 161 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 SERPINB12Q96P63 405 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 ASCC2Q9H1I8 757 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-202ENST00000356435 KLK14Q9P0G3 267 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 STK39Q9UEW8 545 aa5.71□□□□□ -1.5
PTPRD-202ENST00000356435 E2F8A0AVK6 867 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 HS6ST1O60243 411 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 LSP1P33241 339 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NPY2RP49146 381 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 GUCY1A3Q02108 690 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ACOX1Q15067 660 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SPDYCQ5MJ68 293 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SAMD7Q7Z3H4 446 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CDR2LQ86X02 465 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 FBXO16Q8IX29 292 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 GSPT2Q8IYD1 628 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 AGGF1Q8N302 714 aaeCLIP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MAB21L3Q8N8X9 362 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TUBGCP3Q96CW5 907 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CGRRF1Q99675 332 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 BBS2Q9BXC9 721 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM9Q9C026 710 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 FANCEQ9HB96 536 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 AXIN2Q9Y2T1 843 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PCDHB5Q9Y5E4 795 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 AGLP35573 1532 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 A0A1W2PQJ5 194 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 E9PBE3 544 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 UBE2Q2LH0YL09 131 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RBAK-RBAKDNI3L0D1 243 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 KCNQ2O43526 872 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SLC26A2P50443 739 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MDH1BQ5I0G3 518 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PRAMEF18Q5VWM3 479 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CES5AQ6NT32 575 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NEK10Q6ZWH5 1172 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MIEF2Q96C03 454 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NPHS2Q9NP85 383 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RTN3O95197 1032 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RANBP1P43487 201 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PLOD1Q02809 727 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CYP24A1Q07973 514 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RALGDSQ12967 914 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 STX5Q13190 355 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MAD2L1Q13257 205 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 PTGISQ16647 500 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 DAB2IPQ5VWQ8 1189 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 STOX1Q6ZVD7 989 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RD3Q7Z3Z2 195 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NBPF15Q8N660 670 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NOA1Q8NC60 698 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 USP7Q93009 1102 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CENPTQ96BT3 561 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 FBXO44Q9H4M3 255 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TBC1D23Q9NUY8 699 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MARCOQ9UEW3 520 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 LZTS1Q9Y250 596 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NUDT14O95848 222 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MYBP10242 640 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ACO1P21399 889 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CLK3P49761 638 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 C21orf59P57076 290 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SLC18A3Q16572 532 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CYP2A13Q16696 494 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 LINC00116Q8NCU8 138 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 LPCAT1Q8NF37 534 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MED8Q96G25 268 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 THUMPD3Q9BV44 507 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 FICDQ9BVA6 458 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 IGFLR1Q9H665 355 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RGS18Q9NS28 235 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ITGA11Q9UKX5 1188 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SATB2Q9UPW6 733 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 FAM220BPB1ANY3 271 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TIMM44O43615 452 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 USP1O94782 785 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 GLP2RO95838 553 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ENO2P09104 434 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RBP1P09455 135 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 NAMPTP43490 491 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CCT8P50990 548 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 BST2Q10589 180 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 MMRN1Q13201 1228 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SMTNL2Q2TAL5 461 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CEP68Q76N32 757 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 HDDC2Q7Z4H3 204 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SLFN11Q7Z7L1 901 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 S100A13Q99584 98 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 SMAD5Q99717 465 aaKnown RBP5.7□□□□□ -1.5
PTPRD-202ENST00000356435 GANQ9H2C0 597 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 RAD21L1Q9H4I0 556 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 CAAP1Q9H8G2 361 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 ENOPH1Q9UHY7 261 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 TTC26A0AVF1 554 aa5.7□□□□□ -1.5
PTPRD-202ENST00000356435 H3BMM5 538 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms