RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 FAM92AA1XBS5 289 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
CAPN3-204ENST00000356316 BEST1O76090 585 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 CD58P19256 250 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
CAPN3-204ENST00000356316 GTF2H1P32780 548 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 ASPAP45381 313 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 SLC8A3P57103 927 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 ENPEPQ07075 957 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 DPYDQ12882 1025 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 NFIL3Q16649 462 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 GAB4Q2WGN9 574 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 EMC10Q5UCC4 262 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 HTR3DQ70Z44 454 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 LPCAT2Q7L5N7 544 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 BBS7Q8IWZ6 715 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
CAPN3-204ENST00000356316 IL17RCQ8NAC3 791 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 HEXIM2Q96MH2 286 aaKnown RBP11.25□□□□□ -0.61
CAPN3-204ENST00000356316 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
CAPN3-204ENST00000356316 DUSP9Q99956 384 aaKnown RBP11.25□□□□□ -0.61
CAPN3-204ENST00000356316 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 PCDHA5Q9Y5H7 936 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 THADAQ6YHU6 1953 aa11.25□□□□□ -0.61
CAPN3-204ENST00000356316 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 BCLAF3A2AJT9 711 aaKnown RBP11.24□□□□□ -0.61
CAPN3-204ENST00000356316 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 SGK1O00141 431 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 CETN3O15182 167 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 HOXC11O43248 304 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TULP3O75386 442 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 ZNF202O95125 648 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TRIM49P0CI25 452 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TRIM49CP0CI26 452 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 PLA2G4AP47712 749 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 DHPSP49366 369 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-204ENST00000356316 PPP3CAQ08209 521 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 INCA1Q0VD86 236 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 C10orf76Q5T2E6 689 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 DAB2IPQ5VWQ8 1189 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 KRT39Q6A163 491 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 CLEC20AQ6ZU45 233 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 C12orf40Q86WS4 652 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 ZNF513Q8N8E2 541 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-204ENST00000356316 ZMIZ2Q8NF64 920 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 MDGA1Q8NFP4 955 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TAS1R2Q8TE23 839 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
CAPN3-204ENST00000356316 CNTNAP3BQ96NU0 1288 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TMEM8AQ9HCN3 771 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 RXFP3Q9NSD7 469 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 RMND1Q9NWS8 449 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 NAGPAQ9UK23 515 aa11.24□□□□□ -0.61
CAPN3-204ENST00000356316 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 CYP26A1O43174 497 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 TBX18O95935 607 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 EPB41P11171 864 aaKnown RBP11.23□□□□□ -0.61
CAPN3-204ENST00000356316 RALAP11233 206 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 RARGP13631 454 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 KIR2DL1P43626 348 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-204ENST00000356316 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 ZNF394Q53GI3 561 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 C1orf220Q5T0J3 134 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 PMS2CLQ68D20 193 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 TPGS1Q6ZTW0 290 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 SFTPA1Q8IWL2 248 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 HMGB4Q8WW32 186 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 PIGKQ92643 395 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 TWNKQ96RR1 684 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
CAPN3-204ENST00000356316 TSG101Q99816 390 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 EDEM2Q9BV94 578 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 LSM14BQ9BX40 385 aaKnown RBP11.23□□□□□ -0.61
CAPN3-204ENST00000356316 KLF16Q9BXK1 252 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-204ENST00000356316 ZDHHC4Q9NPG8 344 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 CYLDQ9NQC7 956 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 DNAJC17Q9NVM6 304 aaKnown RBP11.23□□□□□ -0.61
CAPN3-204ENST00000356316 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
CAPN3-204ENST00000356316 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms