RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MSLNQ13421 630 aaPredicted RBP10.52□□□□□ -0.72
PTPRA-203ENST00000356147 HIC1Q14526 733 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.72
PTPRA-203ENST00000356147 RABGAP1LQ5R372 815 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 SEPT12Q8IYM1 358 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 ATG4CQ96DT6 458 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 ATXN7L3BQ96GX2 97 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 CGRRF1Q99675 332 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 PNPOQ9NVS9 261 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 HMX2A2RU54 273 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 SRGAP2CP0DJJ0 459 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 STIP1P31948 543 aaKnown RBP10.52□□□□□ -0.73
PTPRA-203ENST00000356147 CDK7P50613 346 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 ZNF132P52740 706 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 CLDN10P78369 228 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 FSTL1Q12841 308 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 TRPC3Q13507 836 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 TBC1D25Q3MII6 688 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 TEX44Q53QW1 395 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 ZC3H12AQ5D1E8 599 aaKnown RBP10.52□□□□□ -0.73
PTPRA-203ENST00000356147 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-203ENST00000356147 GDPD5Q8WTR4 605 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 PPCSQ9HAB8 311 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 S100A14Q9HCY8 104 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 USP18Q9UMW8 372 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 QSER1Q2KHR3 1735 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 NRXN2Q9P2S2 1712 aa10.52□□□□□ -0.73
PTPRA-203ENST00000356147 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ASS1P00966 412 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 C1QAP02745 245 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ATP6V1B1P15313 513 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 SP2Q02086 613 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 BTKQ06187 659 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 SLC5A9Q2M3M2 681 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 EML3Q32P44 896 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 EFHC1Q5JVL4 640 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 FBXL19Q6PCT2 694 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 MARK2Q7KZI7 788 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 DHDDSQ86SQ9 333 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ADGRF2Q8IZF7 708 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 RNF148Q8N7C7 305 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 TWNKQ96RR1 684 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 XAB2Q9HCS7 855 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 JPH1Q9HDC5 661 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 RNF146Q9NTX7 359 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 MAGED2Q9UNF1 606 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CAPN8A6NHC0 703 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 APOC2P02655 101 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 GJB1P08034 283 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 KRT7P08729 469 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CRABP2P29373 138 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CPOXP36551 454 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 DEUP1Q05D60 604 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 MED21Q13503 144 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CCNIQ14094 377 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 GK3PQ14409 553 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 MMEL1Q495T6 779 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 LRRC23Q53EV4 343 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 FASTKD1Q53R41 847 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 FAM102AQ5T9C2 384 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ATG16L1Q676U5 607 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CASC4Q6P4E1 433 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 UNC5AQ6ZN44 842 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CAND1Q86VP6 1230 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 HACE1Q8IYU2 909 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 DEFB107AQ8IZN7 70 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 FAM151AQ8WW52 585 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 PPP2R3CQ969Q6 453 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 PGBD4Q96DM1 585 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 NR1H4Q96RI1 486 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 OXCT2Q9BYC2 517 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CEP41Q9BYV8 373 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 PDLIM7Q9NR12 457 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 DDX18Q9NVP1 670 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 SOX13Q9UN79 622 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ZNF831Q5JPB2 1677 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 F8W8V4 182 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 HMGCRP04035 888 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 RAG1P15918 1043 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 KCNA2P16389 499 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ABCG1P45844 678 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 INHBCP55103 352 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 TGFB2P61812 414 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 KCNJ11Q14654 390 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 PPM1JQ5JR12 505 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CES3Q6UWW8 571 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 ST13P4Q8IZP2 240 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 STKLD1Q8NE28 680 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 CENPKQ9BS16 269 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 MRIQ9BWK5 157 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 SLC38A10Q9HBR0 1119 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms