RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CYB561D2O14569 222 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 RHOCP08134 193 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 MYL12AP19105 171 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ACOT1Q86TX2 421 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SH2D3CQ8N5H7 860 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ELOVL6Q9H5J4 265 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ACTR8Q9H981 624 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.75■□□□□ 0.435e-8■■■■■ 57.9
COL27A1-201ENST00000356083 PAK5Q9P286 719 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 KDM5DQ9BY66 1539 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SLC12A8A0AV02 714 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ALDH2P05091 517 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 PTPN12Q05209 780 aaKnown RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 CHPFQ8IZ52 775 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SEPT1Q8WYJ6 367 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 EXOC2Q96KP1 924 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 TARSP26639 723 aaKnown RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SERPINH1P50454 418 aaKnown RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 PLEKHA7Q6IQ23 1121 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 RCVRNP35243 200 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SMU1Q2TAY7 513 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 KLHL23Q8NBE8 558 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SEPHS2Q99611 448 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ERVV-1B6SEH8 477 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 KPNA3O00505 521 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 GPR182O15218 404 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ARF3P61204 181 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ARF1P84077 181 aaKnown RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 PTSQ03393 145 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 NFYCQ13952 458 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 NAPEPLDQ6IQ20 393 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SAPCD2Q86UD0 394 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 FAM228AQ86W67 206 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ATP6V1G3Q96LB4 118 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 ILKAPQ9H0C8 392 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 STARD7Q9NQZ5 370 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 GPN3Q9UHW5 284 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-201ENST00000356083 MAFFQ9ULX9 164 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 TBC1D3BA6NDS4 549 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 OR10H2O60403 315 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 EMC2Q15006 297 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SLC30A9Q6PML9 568 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 FAM129BQ96TA1 746 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 KRT6AP02538 564 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 KRT6BP04259 564 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 KRT6CP48668 564 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 SERPINB9P50453 376 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 PPP1R18Q6NYC8 613 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 MARK2Q7KZI7 788 aaKnown RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 TRPM8Q7Z2W7 1104 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 VPS9D1Q9Y2B5 631 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 ANXA9O76027 345 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 SNRPAP09012 282 aaKnown RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 SYTL5Q8TDW5 730 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 PIGKQ92643 395 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 KCNS3Q9BQ31 491 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 BHLHE41Q9C0J9 482 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 SETMARQ53H47 684 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 ARL2BPQ9Y2Y0 163 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 TTC26A0AVF1 554 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 SLC2A4P14672 509 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 CEBPGP53567 150 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 STXBP1P61764 594 aaKnown RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 XKR3Q5GH77 459 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 OTUD3Q5T2D3 398 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 LRRC39Q96DD0 335 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 STRBPQ96SI9 672 aaKnown RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 SLC35C2Q9NQQ7 365 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 CPDO75976 1380 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 TMEM94Q12767 1356 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 BAIAP3O94812 1187 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 ATP6AP1LQ52LC2 224 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 CDC73Q6P1J9 531 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 FRMD5Q7Z6J6 570 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 ERP27Q96DN0 273 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 PRRG3Q9BZD7 231 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 DPY30Q9C005 99 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 LARGE1O95461 756 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 RHOAP61586 193 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 KIAA0408Q6ZU52 694 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 ATXN3LQ9H3M9 355 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 MANSC1Q9H8J5 431 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 C10orf88Q9H8K7 445 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 TMA7Q9Y2S6 64 aaKnown RBP17.74■□□□□ 0.43
COL27A1-201ENST00000356083 PFASO15067 1338 aa17.74■□□□□ 0.43
COL27A1-201ENST00000356083 ALG11Q2TAA5 492 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 KIAA1324Q6UXG2 1013 aaKnown RBP17.73■□□□□ 0.43
COL27A1-201ENST00000356083 TRAPPC5Q8IUR0 188 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 DAW1Q8N136 415 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 FIG4Q92562 907 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 PLXNC1O60486 1568 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 FAM25EA8MYX2 175 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 TSPAN9O75954 239 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 MFN2O95140 757 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 ARL3P36405 182 aa17.73■□□□□ 0.43
COL27A1-201ENST00000356083 EPS8Q12929 822 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms