RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 GPRC5DQ9NZD1 345 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 UBA2Q9UBT2 640 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 S100A1P23297 94 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 N4BP2L1Q5TBK1 243 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 RTL3Q8N8U3 475 aaKnown RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 S100ZQ8WXG8 99 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 CDRT15Q96T59 188 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 RNF112Q9ULX5 631 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ITM2BQ9Y287 266 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 AAR2Q9Y312 384 aaKnown RBP13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 SH3GLB1Q9Y371 365 aa13.1□□□□□ -0.31
SYNCRIP-201ENST00000355238 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 TK2O00142 265 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 PROCP04070 461 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 ANPEPP15144 967 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 CDH3P22223 829 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 AKT1P31749 480 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 CDK7P50613 346 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 FBXW4P57775 412 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SYTL3Q4VX76 610 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 PI4K2AQ9BTU6 479 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 FHDC1Q9C0D6 1143 aaPredicted RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 C17orf75Q9HAS0 396 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 DMTF1Q9Y222 760 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 AVPR1AP37288 418 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 VAC14Q08AM6 782 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SGO1Q5FBB7 561 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 IKBIPQ70UQ0 350 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 RAD51BO15315 384 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 IFNA14P01570 189 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 KRT6AP02538 564 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 ALOX5P09917 674 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 CRB1P82279 1406 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 UBASH3BQ8TF42 649 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 PABPC5Q96DU9 382 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 QKIQ96PU8 341 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 HDHD2Q9H0R4 259 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SERHL2Q9H4I8 314 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SERHLQ9NQF3 203 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 ENOPH1Q9UHY7 261 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 IDH3BO43837 385 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 SOAT1P35610 550 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 NT5DC3Q86UY8 548 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 DGCR14Q96DF8 476 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 UGT2B28Q9BY64 529 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 GANQ9H2C0 597 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 IARS2Q9NSE4 1012 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 LRRC4BQ9NT99 713 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 PIPSLA2A3N6 862 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 PSMA3P25788 255 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 CCT3P49368 545 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 CLEC16AQ2KHT3 1053 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 TIMM50Q3ZCQ8 353 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 KYAT3Q6YP21 454 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZNF662Q6ZS27 426 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM45AQ8TCE6 357 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 TIMMDC1Q9NPL8 285 aa13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRMT6Q9UJA5 497 aaKnown RBP13.09□□□□□ -0.31
SYNCRIP-201ENST00000355238 MAGEB2O15479 319 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 PPP3CCP48454 512 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 MPP3Q13368 585 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 OTUD3Q5T2D3 398 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 AAGABQ6PD74 315 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 SYTL1Q8IYJ3 562 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CCDC33Q8N5R6 958 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 PLEKHG4BQ96PX9 1271 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 ANKEF1Q9NU02 776 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 INPP4BO15327 924 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 MLNP12872 115 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CHRM3P20309 590 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 BMPR2Q13873 1038 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 DRG1Q9Y295 367 aaKnown RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 HBS1LQ9Y450 684 aaKnown RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CDC42BPGQ6DT37 1551 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 MRASO14807 208 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 KATNA1O75449 491 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 ATG7O95352 703 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 STAT5BP51692 787 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 CACNB3P54284 484 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 FASTKQ14296 549 aaKnown RBP13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 RNFT2Q96EX2 444 aa13.08□□□□□ -0.32
SYNCRIP-201ENST00000355238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.08□□□□□ -0.328e-8■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms